History of AFNI updates  

|
April 01, 2019 12:38PM
Hi Paul

thanks for your help. I've followed your instruction but things doesn't change (see below)

rPkgsInstall -pkgs ALL
Installing package into ‘/home/davide/R’
(as ‘lib’ is unspecified)
Warning: dependency ‘mvtnorm’ is not available
also installing the dependencies ‘sf’, ‘bridgesampling’, ‘spdep’

trying URL '[cran.us.r-project.org];
Content type 'application/x-gzip' length 8166770 bytes (7.8 MB)
==================================================
downloaded 7.8 MB

trying URL '[cran.us.r-project.org];
Content type 'application/x-gzip' length 1186306 bytes (1.1 MB)
==================================================
downloaded 1.1 MB

trying URL '[cran.us.r-project.org];
Content type 'application/x-gzip' length 1283061 bytes (1.2 MB)
==================================================
downloaded 1.2 MB

trying URL '[cran.us.r-project.org];
Content type 'application/x-gzip' length 4333857 bytes (4.1 MB)
==================================================
downloaded 4.1 MB

* installing *source* package ‘sf’ ...
** package ‘sf’ successfully unpacked and MD5 sums checked
configure: CC: gcc -std=gnu99
configure: CXX: g++ -std=gnu++11
checking for gdal-config... no
no
configure: error: gdal-config not found or not executable.
ERROR: configuration failed for package ‘sf’
* removing ‘/home/davide/R/sf’
ERROR: dependency ‘mvtnorm’ is not available for package ‘bridgesampling’
* removing ‘/home/davide/R/bridgesampling’
ERROR: dependency ‘sf’ is not available for package ‘spdep’
* removing ‘/home/davide/R/spdep’
ERROR: dependency ‘bridgesampling’ is not available for package ‘brms’
* removing ‘/home/davide/R/brms’

The downloaded source packages are in
‘/tmp/RtmpidJQ7G/downloaded_packages’

++ Note: @ 18:34:02
This package has been installed on the computer: brms

Warning messages:
1: In install.packages(pkgs_miss, dep = TRUE, repos = site) :
installation of package ‘sf’ had non-zero exit status
2: In install.packages(pkgs_miss, dep = TRUE, repos = site) :
installation of package ‘bridgesampling’ had non-zero exit status
3: In install.packages(pkgs_miss, dep = TRUE, repos = site) :
installation of package ‘spdep’ had non-zero exit status
4: In install.packages(pkgs_miss, dep = TRUE, repos = site) :
installation of package ‘brms’ had non-zero exit status


Dave
Subject Author Posted

AFNI R packages installation issue

dmomi April 01, 2019 07:34AM

Re: AFNI R packages installation issue

ptaylor April 01, 2019 09:54AM

Re: AFNI R packages installation issue

dmomi April 01, 2019 11:50AM

Re: AFNI R packages installation issue

ptaylor April 01, 2019 12:11PM

Re: AFNI R packages installation issue

dmomi April 01, 2019 12:38PM

Re: AFNI R packages installation issue

ptaylor April 01, 2019 12:59PM

Re: AFNI R packages installation issue

dmomi April 01, 2019 01:04PM

Re: AFNI R packages installation issue

ptaylor April 01, 2019 01:12PM

Re: AFNI R packages installation issue

dmomi April 01, 2019 01:21PM

Re: AFNI R packages installation issue

ptaylor April 01, 2019 01:33PM

Re: AFNI R packages installation issue

ptaylor April 23, 2019 05:48PM

Re: AFNI R packages installation issue

dmomi April 29, 2019 03:50AM