AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
May 31, 2019 01:31PM
Hello,

I have a question about running 3dMVM. I would like to run a 3 Group x 2 Phase x 2 Reinforcement repeated measures ANOVA and I am not sure whether I should specify "glt" or "glf" -what is the difference between the two? Are "glf" only for variables that have more than 2 factors?

I have provided my code and a breakdown of my ANOVA below.

Thank you,
Tamara


ANOVA:
3 Group (control vs. temporal vs. frontal) x 2 Phase (acquisition vs. reinforcement) x 2 Reinforcement (correct vs. incorrect)

CODE:

3dMVM -prefix group -jobs 8 \
-bsVars group \
-wsVars "phase*reinf" \
-SS_type 3 \
-num_glt 3 \
-gltLabel 1 phase -gltCode 1 'phase : 1*acq -1*rev' \
-gltLabel 2 reinf -gltCode 2 'reinf : 1*corr -1*incor' \
-gltLabel 3 phase_reinf -gltCode 3 'phase : 1*acq -1*rev reinf : 1*corr -1*incor' \
-num_glf 4 \
-glfLabel 1 group -glfCode 1 'group : 1*ctrl -1*temp & 1*ctrl -1*front' \
-glfLabel 2 group_phase -glfCode 2 'group : 1*ctrl -1*temp & 1*ctrl -1*front phase : 1*acq -1*rev' \
-glfLabel 3 group_reinf -glfCode 3 'group : 1*ctrl -1*temp & 1*ctrl -1*front reinf : 1*corr -1*incor' \
-glfLabel 4 3way_inter -glfCode 4 'group : 1*ctrl -1*temp & 1*ctrl -1*front phase : 1*acq -1*rev reinf : 1*corr -1*incor' \
-dataTable \
Subj group phase reinf InputFile \
8225 temp acq corr 8225/Proc_FIRST_8225_April2019.results/8225_RevP_acq_corr_fed+tlrc \
.....
....
....
Subject Author Posted

3dMVM: glt vs. glf

tamtam May 31, 2019 01:31PM

Re: 3dMVM: glt vs. glf

gang May 31, 2019 06:02PM

Re: 3dMVM: glt vs. glf

tamtam June 03, 2019 12:05PM

Re: 3dMVM: glt vs. glf

gang June 05, 2019 10:18AM