AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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June 21, 2019 11:17PM
Hi, Shankar-

Cool, glad that is working well.

I think with multiple threading, there is a diminishing returns after a while: doubling the number of threads doesn't halve the runtime, because there is 1) some part of the processing that is not parallelized, and 2) there is computational cost to multithreading (organizing jobs, separating and rejoining data, etc.). Eventually, adding more CPUs doesn't add more efficiency, because there is so much cost from the second phenomenon. It might be that things top out around 12 or so in this case (that actually rings a bell with what Bob has mentioned previously, I think). But, if running with 12 or 48 doesn't matter for you, you can run 4 job simultaneously, each with 12 threads-- so, "parallelizing" your analysis further in that sense still works.

--pt
Subject Author Posted

@sswarper speed

st June 21, 2019 12:14PM

Re: @sswarper speed

ptaylor June 21, 2019 01:17PM

Re: @sswarper speed

ptaylor June 21, 2019 01:57PM

Re: @sswarper speed

st June 21, 2019 03:51PM

Re: @sswarper speed

ptaylor June 21, 2019 04:08PM

Re: @sswarper speed

st June 21, 2019 09:58PM

Re: @sswarper speed

ptaylor June 21, 2019 11:17PM

Re: @sswarper speed

st June 22, 2019 02:00PM

Re: @sswarper speed

ptaylor June 22, 2019 02:33PM