Hi Gang,
Thank you so much for the help - I really appreciate it.
I am currently receiving the following error:
Error in `[.data.frame`(dataStr, , vars[ii]) : undefined columns selected
Calls: process.LME.opts ... gl_Constr -> glfConstr -> levels -> [ -> [.data.frame
Execution halted
This is the version of afni I am using: Precompiled binary linux_ubuntu_16_64: Sep 13 2019 (Version AFNI_19.2.24 'Claudius')
Here is the command ***EDIT***: I also tried the command with the indices in the datatable surrounded by quotes ("[100]")
3dLME \
-prefix Dprime_coi \
-model 'Dprime' \
-ranEff '~1+Dprime' \
-qVars 'Dprime' \
-num_glt 3 \
-gltLabel 1 'MvH' -gltCode 1 'Cond: 1*month -1*hour' \
-gltLabel 2 'MWvDH' -gltCode 2 'Cond: 1*month 1*week -1*hour -1*day' \
-gltLabel 3 'avg_cond' -gltCode 3 'Cond: 1*month +1*hour +1*week +1*day' \
-dataTable \
Subj Cond Dprime InputFile \
SS01 hour 2.283607767 decon_alltime_REML/SS01_decon_results_all_targets_REML+orig[100] \
SS02 hour 2.283607767 decon_alltime_REML/SS02_decon_results_all_targets_REML+orig[100] \
SS04 hour 2.283607767 decon_alltime_REML/SS04_decon_results_all_targets_REML+orig[100] \
SS06 hour 2.283607767 decon_alltime_REML/SS06_decon_results_all_targets_REML+orig[100] \
SS07 hour 2.283607767 decon_alltime_REML/SS07_decon_results_all_targets_REML+orig[100] \
SS08 hour 2.283607767 decon_alltime_REML/SS08_decon_results_all_targets_REML+orig[100] \
SS09 hour 2.283607767 decon_alltime_REML/SS09_decon_results_all_targets_REML+orig[100] \
SS10 hour 2.283607767 decon_alltime_REML/SS10_decon_results_all_targets_REML+orig[100] \
SS11 hour 2.283607767 decon_alltime_REML/SS11_decon_results_all_targets_REML+orig[100] \
SS12 hour 2.283607767 decon_alltime_REML/SS12_decon_results_all_targets_REML+orig[100] \
SS13 hour 2.283607767 decon_alltime_REML/SS13_decon_results_all_targets_REML+orig[100] \
SS14 hour 2.283607767 decon_alltime_REML/SS14_decon_results_all_targets_REML+orig[100] \
SS15 hour 2.283607767 decon_alltime_REML/SS15_decon_results_all_targets_REML+orig[100] \
SS16 hour 2.283607767 decon_alltime_REML/SS16_decon_results_all_targets_REML+orig[100] \
SS17 hour 2.283607767 decon_alltime_REML/SS17_decon_results_all_targets_REML+orig[100] \
SS18 hour 2.283607767 decon_alltime_REML/SS18_decon_results_all_targets_REML+orig[100] \
SS19 hour 2.283607767 decon_alltime_REML/SS19_decon_results_all_targets_REML+orig[100] \
SS20 hour 2.283607767 decon_alltime_REML/SS20_decon_results_all_targets_REML+orig[100] \
SS21 hour 2.283607767 decon_alltime_REML/SS21_decon_results_all_targets_REML+orig[100] \
SS22 hour 2.283607767 decon_alltime_REML/SS22_decon_results_all_targets_REML+orig[100] \
SS23 hour 2.283607767 decon_alltime_REML/SS23_decon_results_all_targets_REML+orig[100] \
SS01 day 2.010995168 decon_alltime_REML/SS01_decon_results_all_targets_REML+orig[103] \
SS02 day 2.010995168 decon_alltime_REML/SS02_decon_results_all_targets_REML+orig[103] \
SS04 day 2.010995168 decon_alltime_REML/SS04_decon_results_all_targets_REML+orig[103] \
SS06 day 2.010995168 decon_alltime_REML/SS06_decon_results_all_targets_REML+orig[103] \
SS07 day 2.010995168 decon_alltime_REML/SS07_decon_results_all_targets_REML+orig[103] \
SS08 day 2.010995168 decon_alltime_REML/SS08_decon_results_all_targets_REML+orig[103] \
SS09 day 2.010995168 decon_alltime_REML/SS09_decon_results_all_targets_REML+orig[103] \
SS10 day 2.010995168 decon_alltime_REML/SS10_decon_results_all_targets_REML+orig[103] \
SS11 day 2.010995168 decon_alltime_REML/SS11_decon_results_all_targets_REML+orig[103] \
SS12 day 2.010995168 decon_alltime_REML/SS12_decon_results_all_targets_REML+orig[103] \
SS13 day 2.010995168 decon_alltime_REML/SS13_decon_results_all_targets_REML+orig[103] \
SS14 day 2.010995168 decon_alltime_REML/SS14_decon_results_all_targets_REML+orig[103] \
SS15 day 2.010995168 decon_alltime_REML/SS15_decon_results_all_targets_REML+orig[103] \
SS16 day 2.010995168 decon_alltime_REML/SS16_decon_results_all_targets_REML+orig[103] \
SS17 day 2.010995168 decon_alltime_REML/SS17_decon_results_all_targets_REML+orig[103] \
SS18 day 2.010995168 decon_alltime_REML/SS18_decon_results_all_targets_REML+orig[103] \
SS19 day 2.010995168 decon_alltime_REML/SS19_decon_results_all_targets_REML+orig[103] \
SS20 day 2.010995168 decon_alltime_REML/SS20_decon_results_all_targets_REML+orig[103] \
SS21 day 2.010995168 decon_alltime_REML/SS21_decon_results_all_targets_REML+orig[103] \
SS22 day 2.010995168 decon_alltime_REML/SS22_decon_results_all_targets_REML+orig[103] \
SS23 day 2.010995168 decon_alltime_REML/SS23_decon_results_all_targets_REML+orig[103] \
SS01 week 1.149194158 decon_alltime_REML/SS01_decon_results_all_targets_REML+orig[106] \
SS02 week 1.477045692 decon_alltime_REML/SS02_decon_results_all_targets_REML+orig[106] \
SS04 week 1.477045692 decon_alltime_REML/SS04_decon_results_all_targets_REML+orig[106] \
SS06 week 1.477045692 decon_alltime_REML/SS06_decon_results_all_targets_REML+orig[106] \
SS07 week 1.477045692 decon_alltime_REML/SS07_decon_results_all_targets_REML+orig[106] \
SS08 week 1.477045692 decon_alltime_REML/SS08_decon_results_all_targets_REML+orig[106] \
SS09 week 1.477045692 decon_alltime_REML/SS09_decon_results_all_targets_REML+orig[106] \
SS10 week 1.477045692 decon_alltime_REML/SS10_decon_results_all_targets_REML+orig[106] \
SS11 week 1.477045692 decon_alltime_REML/SS11_decon_results_all_targets_REML+orig[106] \
SS12 week 1.477045692 decon_alltime_REML/SS12_decon_results_all_targets_REML+orig[106] \
SS13 week 1.477045692 decon_alltime_REML/SS13_decon_results_all_targets_REML+orig[106] \
SS14 week 1.477045692 decon_alltime_REML/SS14_decon_results_all_targets_REML+orig[106] \
SS15 week 1.477045692 decon_alltime_REML/SS15_decon_results_all_targets_REML+orig[106] \
SS16 week 1.477045692 decon_alltime_REML/SS16_decon_results_all_targets_REML+orig[106] \
SS17 week 1.477045692 decon_alltime_REML/SS17_decon_results_all_targets_REML+orig[106] \
SS18 week 1.477045692 decon_alltime_REML/SS18_decon_results_all_targets_REML+orig[106] \
SS19 week 1.477045692 decon_alltime_REML/SS19_decon_results_all_targets_REML+orig[106] \
SS20 week 1.477045692 decon_alltime_REML/SS20_decon_results_all_targets_REML+orig[106] \
SS21 week 1.477045692 decon_alltime_REML/SS21_decon_results_all_targets_REML+orig[106] \
SS22 week 1.477045692 decon_alltime_REML/SS22_decon_results_all_targets_REML+orig[106] \
SS23 week 1.477045692 decon_alltime_REML/SS23_decon_results_all_targets_REML+orig[106] \
SS01 month 1.149194158 decon_alltime_REML/SS01_decon_results_all_targets_REML+orig[109] \
SS02 month 1.149194158 decon_alltime_REML/SS02_decon_results_all_targets_REML+orig[109] \
SS04 month 1.149194158 decon_alltime_REML/SS04_decon_results_all_targets_REML+orig[109] \
SS06 month 1.149194158 decon_alltime_REML/SS06_decon_results_all_targets_REML+orig[109] \
SS07 month 1.149194158 decon_alltime_REML/SS07_decon_results_all_targets_REML+orig[109] \
SS08 month 1.149194158 decon_alltime_REML/SS08_decon_results_all_targets_REML+orig[109] \
SS09 month 1.149194158 decon_alltime_REML/SS09_decon_results_all_targets_REML+orig[109] \
SS10 month 1.149194158 decon_alltime_REML/SS10_decon_results_all_targets_REML+orig[109] \
SS11 month 1.149194158 decon_alltime_REML/SS11_decon_results_all_targets_REML+orig[109] \
SS12 month 1.149194158 decon_alltime_REML/SS12_decon_results_all_targets_REML+orig[109] \
SS13 month 1.149194158 decon_alltime_REML/SS13_decon_results_all_targets_REML+orig[109] \
SS14 month 1.149194158 decon_alltime_REML/SS14_decon_results_all_targets_REML+orig[109] \
SS15 month 1.149194158 decon_alltime_REML/SS15_decon_results_all_targets_REML+orig[109] \
SS16 month 1.149194158 decon_alltime_REML/SS16_decon_results_all_targets_REML+orig[109] \
SS17 month 1.149194158 decon_alltime_REML/SS17_decon_results_all_targets_REML+orig[109] \
SS18 month 1.149194158 decon_alltime_REML/SS18_decon_results_all_targets_REML+orig[109] \
SS19 month 1.149194158 decon_alltime_REML/SS19_decon_results_all_targets_REML+orig[109] \
SS20 month 1.149194158 decon_alltime_REML/SS20_decon_results_all_targets_REML+orig[109] \
SS21 month 1.149194158 decon_alltime_REML/SS21_decon_results_all_targets_REML+orig[109] \
SS22 month 1.149194158 decon_alltime_REML/SS22_decon_results_all_targets_REML+orig[109] \
SS23 month 1.149194158 decon_alltime_REML/SS23_decon_results_all_targets_REML+orig[109]
Edited 3 time(s). Last edit at 01/30/2020 02:41PM by Catherine Tallman.
