Howdy-

I wonder if one issue is that for the option -NN_dset_map you have entered not a full dset (*.niml.dset), but an ROI map (*.roi). Though, note that there is already a set of *annot.niml.dset files for the aparcs:
std.{60,141}.lh.aparc.a2009s.annot.niml.dset
std.{60,141}.rh.aparc.a2009s.annot.niml.dset
Can I ask what your larger goal is with this command? Is using "-ld 140" really necessary, when there is already a std mesh with essentially "-ld 141"?

One final note: when running @SUMA_Make_Spec_FS, we generally recommend include one of the -GNIFTI/-GIFTI/-IFTI options; when @SUMA_Make_Spec finishes and one of those options has *not* been used, there is a message displayed:

WARNING!
  You didn't use the '-NIFTI' or '-GIFTI' or similarly-named
  option flag! Are you *sure* you didn't want to?  Learning about
  this option changed my life-- it might just change yours, too.
  Please read the helpfile entry for '-NIFTI' if you don't know
  what I'm talking about here.

--pt



Edited 2 time(s). Last edit at 02/21/2020 06:19AM by ptaylor.