Dear AFNI experts,
Hope you all are staying safe. I downloaded unprocessed resting-state data from the Human Connectome project where they had 4 scans for each participant (Session 1 L to R, Session 1 R to L, Session 2 L to R, Session 2 R to L). These 4 epi data were concatenated using 3dTcat and submitted to the proc py script like below.
afni_proc.py \
-blocks despike align tlrc volreg blur mask regress \
-copy_anat /Volumes/LAVA/"$subj"/anat/"$subj"_anat+orig \
-anat_follower_ROI aaseg anat /Volumes/LAVA/"$subj"/anat/aparc.a2009s+aseg.nii \
-anat_follower_ROI aeseg epi /Volumes/LAVA/"$subj"/anat/aparc.a2009s+aseg.nii \
-anat_follower_ROI FSvent epi /Volumes/LAVA/"$subj"/anat/"$subj"_vent.nii \
-anat_follower_ROI FSWm epi /Volumes/LAVA/"$subj"/anat/"$subj"_wm.nii \
-anat_follower_erode FSvent FSWm \
-dsets /Volumes/LAVA/"$subj"/trunc_rest_"$subj"+orig \
-out_dir Proc_results \
-script py_result_"$subj"_script \
-scr_overwrite \
-subj_id "$subj" \
-align_opts_aea -cost lpc+ZZ -giant_move \
-tlrc_base MNI152_T1_2009c+tlrc \
-tlrc_NL_warp \
-tlrc_NL_awpy_rm no \
-tlrc_no_ss \
-volreg_align_to MIN_OUTLIER \
-volreg_align_e2a \
-volreg_tlrc_warp \
-volreg_warp_dxyz 2.0 \
-regress_apply_mask \
-regress_ROI_PC FSvent 3 \
-regress_make_corr_vols aeseg FSvent \
-regress_anaticor_fast \
-regress_anaticor_label FSWm \
-regress_censor_motion 0.2 \
-regress_censor_outliers 0.1 \
-regress_apply_mot_types demean deriv \
-regress_est_blur_epits \
-regress_est_blur_errts
tcsh -xef py_result_"$subj"_script |& tee output.py_result_"$subj"_script
@ linenum++
end
In the middle of the proc py, I just had an error that I have never seen before (below).
** FATAL ERROR: -polort value can't be over 20
Could you please let me know what caused this issue and how to solve this?
Best,
JW