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Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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November 19, 2020 02:35PM

Registered: 6 years ago
Posts: 101

Hi Rick,

Thank you so much for the thoughtful comments. These really help. I'll pre-process each run separately. I only ran 3dTcat so that should be the original dimension?

Could you please clarify one more thing? After running the preprocessing separately, would it make sense to include each into the group analysis? For example in the 3dttest++, would the below be possible?

-setA ConditionA
Subj1_REST1LR /subject1_REST1LR
Subj1_REST1RL /subject1_REST1RL
Subj1_REST2LR /subject1_REST2LR
Subj1_REST2RL /subject1_REST2RL
.
.
.

-setB ConditionB
Subj1_REST1LR /subject1_REST1LR
Subj1_REST1RL /subject1_REST1RL
Subj1_REST2LR /subject1_REST2LR
Subj1_REST2RL /subject1_REST2RL

Best,
JW

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Subject	Author	Posted
resting state proc py error	JW	November 16, 2020 09:29PM
Re: resting state proc py error	ptaylor	November 17, 2020 10:37PM
Re: resting state proc py error	JW	November 18, 2020 09:10AM
Re: resting state proc py error	rick reynolds	November 19, 2020 11:27AM
Re: resting state proc py error	JW	November 19, 2020 02:35PM
Re: resting state proc py error	rick reynolds	November 19, 2020 02:48PM
Re: resting state proc py error	JW	November 19, 2020 03:21PM
Re: resting state proc py error	gang	November 19, 2020 08:45PM
Re: resting state proc py error	JW	November 20, 2020 08:31AM
Re: resting state proc py error	gang	November 20, 2020 10:53AM
Re: resting state proc py error	gang	November 20, 2020 06:27PM
Re: resting state proc py error	JW	November 23, 2020 12:38PM
Re: resting state proc py error	gang	November 24, 2020 10:32AM