History of AFNI updates  

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March 05, 2021 08:03AM
Hi Rick,

Thanks again for helping with this issue.

I uninstalled XQuartz and reinstalled it (version 2.8.0). The libXp files are still not found. When running 'suma -update_env', here is what I get:

bash-3.2$ suma -update_env
dyld: Library not loaded: /opt/X11/lib/libXp.6.dylib
Referenced from: /Users/claudie/abin/suma
Reason: image not found
Abort trap: 6


Of note, I do not have X11 on this path: 'Applications/Utilities/X11.app', only XQuartz.app.

There are also several other weird things happening. Even though I set my Terminal in bash by default (confirmed when typing echo $0), here is what I get when trying the suma -update_env command:

(base) Claudies-MBP:~ claudie$ afni_system_check.py -check_all
-bash: afni_system_check.py: command not found


(base) Claudies-MBP:~ claudie$ suma -update_env
-bash: suma: command not found


In order to get it working, I have usually to type bash again, while it should be already in bash environment.

I have have no idea how to circumvent/fix this bunch of issues.

Many thanks,

Claudie
Subject Author Posted

Trouble when installing AFNI with macOS Big Sur (version 11.2)

Claudie Gaillard February 28, 2021 10:46AM

Re: Trouble when installing AFNI with macOS Big Sur (version 11.2)

rick reynolds March 02, 2021 01:46PM

Re: Trouble when installing AFNI with macOS Big Sur (version 11.2)

Claudie Gaillard March 02, 2021 07:53PM

Re: Trouble when installing AFNI with macOS Big Sur (version 11.2)

rick reynolds March 03, 2021 03:37PM

Re: Trouble when installing AFNI with macOS Big Sur (version 11.2)

Claudie Gaillard March 04, 2021 08:06AM

Re: Trouble when installing AFNI with macOS Big Sur (version 11.2)

rick reynolds March 04, 2021 09:49AM

Re: Trouble when installing AFNI with macOS Big Sur (version 11.2)

Claudie Gaillard March 05, 2021 08:03AM

Re: Trouble when installing AFNI with macOS Big Sur (version 11.2)

rick reynolds March 05, 2021 03:26PM

Re: Trouble when installing AFNI with macOS Big Sur (version 11.2)

Claudie Gaillard March 08, 2021 08:18AM

Re: Trouble when installing AFNI with macOS Big Sur (version 11.2)

Valerie March 05, 2021 03:30PM

Re: Trouble when installing AFNI with macOS Big Sur (version 11.2)

Zobair March 09, 2021 07:31AM

Re: Trouble when installing AFNI with macOS Big Sur (version 11.2)

rick reynolds March 13, 2021 02:06PM

Re: Trouble when installing AFNI with macOS Big Sur (version 11.2)

rick reynolds March 13, 2021 03:05PM

Re: Trouble when installing AFNI with macOS Big Sur (version 11.2)

cmcnabb March 15, 2021 04:38PM

Re: Trouble when installing AFNI with macOS Big Sur (version 11.2)

rick reynolds March 16, 2021 12:50PM

Re: Trouble when installing AFNI with macOS Big Sur (version 11.2)

ruben.nechifor March 23, 2021 05:25AM

Re: Trouble when installing AFNI with macOS Big Sur (version 11.2)

Claudie Gaillard March 25, 2021 08:18AM