AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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September 07, 2021 10:37AM
The @SSwarper alignment is a different alignment, so I don't want to confuse the two issues here. For the alignment between EPI and anatomical datasets, you can specify one of the partial coverage options to align_epi_anat.py if you have a very limited field of view.

This is just a guess, but the blurriness in the @SSwarper anatomical to template alignment may come from the regions becoming relatively larger in that part of the brain. It doesn't look too extreme here, and this may not be a problem.
Subject Author Posted

Warping/alignment issue

kkerr September 01, 2021 10:02AM

Re: Warping/alignment issue

ptaylor September 01, 2021 02:00PM

Re: Warping/alignment issue Attachments

kkerr September 02, 2021 11:41AM

Re: Warping/alignment issue

Daniel Glen September 02, 2021 01:59PM

Re: Warping/alignment issue Attachments

kkerr September 03, 2021 10:18AM

Re: Warping/alignment issue

ptaylor September 03, 2021 05:03PM

Re: Warping/alignment issue

Daniel Glen September 07, 2021 10:37AM

Re: Warping/alignment issue Attachments

kkerr September 15, 2021 11:53AM

Re: Warping/alignment issue

Daniel Glen September 17, 2021 03:12PM

Re: Warping/alignment issue Attachments

kkerr September 20, 2021 02:56PM

Re: Warping/alignment issue Attachments

kkerr September 20, 2021 03:00PM

Re: Warping/alignment issue

ptaylor September 20, 2021 03:12PM