Hi all,
I am planning to use FATCAT and am preprocessing the data using fMRIPrep. The fMRIPrep by default uses the MNI152NLin2009cAsym template. Is this the same as the mni_icbm152_t1_tal_nlin_asym_09c.nii template that one can obtain online from the McDonnell BIC? I believe the 2009a version is the one that is modified in the fatcat_proc_mni_ref zip file, but I want to use the 2009c version to match with fMRIPrep.
If so, what steps do I need to do to convert it to something like mni_icbm152_t2_relx_tal_nlin_sym_09c_ACPCE.nii.gz? The two main differences seem to be that it is manually AC-PC aligned and regridded to have an even number of slices in all FOV planes. I guess the even numbers has to do with how AFNI finds the center of images? I'd like to have the wtell file, as well, but I don't how to do that either. Any suggestions would be useful.
Thanks,
Matt
