-------------------------------- general ---------------------------------
architecture:         64bit ELF
system:               Linux
release:              3.10.0-1160.59.1.el7.x86_64
version:              #1 SMP Wed Feb 23 16:47:03 UTC 2022
distribution:         CentOS Linux 7.9.2009 Core
number of CPUs:       80
apparent login shell: bash
shell RC file:        .bashrc (exists)

--------------------- AFNI and related program tests ---------------------
which afni           : /share/apps/abin/afni
afni version         : Precompiled binary linux_centos_7_64: Apr  6 2022
                     : AFNI_22.1.02 'Antoninus Pius'
AFNI_version.txt     : AFNI_22.1.02, linux_centos_7_64, Apr 06 2022
which python         : /usr/bin/python
python version       : 2.7.5
which R              : /usr/bin/R
R version            : R version 3.6.0 (2019-04-26) -- "Planting of a Tree"
which tcsh           : /usr/bin/tcsh

instances of various programs found in PATH:
    afni    : 1   (/share/apps/abin/afni)
    R       : 1   (/usr/bin/R)
    python  : 2
      /usr/bin/python2.7
      /opt/rocks/bin/python2.7
    python2 : 2
      /usr/bin/python2.7
      /opt/rocks/bin/python2.7
    python3 : 0


testing ability to start various programs...
    afni                 : success
    suma                 : success
    3dSkullStrip         : success
    uber_subject.py      : success
    3dAllineate          : success
    3dRSFC               : success
    SurfMesh             : success
    3dClustSim           : success
    3dMVM                : success

checking for R packages...
    rPkgsInstall -pkgs ALL -check : FAILURE

        oo Warning:
           These packages are not installed on the computer: afex!
        These packages are not installed on the computer: phia!
        These packages are not installed on the computer: snow!
        These packages are not installed on the computer: lmerTest!
        These packages are not installed on the computer: paran!
        These packages are not installed on the computer: brms!
        These packages are not installed on the computer: corrplot!
        These packages are not installed on the computer: metafor!


R RHOME : /usr/lib64/R

checking for $HOME files...
    .afnirc                   : found
    .sumarc                   : found
    .afni/help/all_progs.COMP : found

------------------------------ python libs -------------------------------
++ module loaded: PyQt4
   module file : /usr/lib64/python2.7/site-packages/PyQt4/__init__.pyc

** failed to load module matplotlib.pyplot
-- matplotlib.pyplot is required

-------------------------------- env vars --------------------------------
PATH = /share/apps/freesurfer_7.1/bin:/share/apps/freesurfer_7.1/fsfast/bin:/share/apps/freesurfer_7.1/tktools:/share/apps/fsl_6.0/bin:/share/apps/freesurfer_7.1/mni/bin:/opt/openmpi/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/opt/ganglia/bin:/opt/ganglia/sbin:/opt/pdsh/bin:/opt/rocks/bin:/opt/rocks/sbin:/opt/gridengine/bin/lx-amd64:/home/ryakupov/hydra-work/apps/QIT/qit-build-linux-latest/bin:/share/apps/abin:/home/ryakupov/hydra-work/apps/EPVS/bin:/usr/local/R2016b/bin:/share/apps/itksnap/bin:/home/ryakupov/bin:/share/apps/ashs/bin:/share/apps/ants/:/share/apps/fsl_6.0/bin:/home/ryakupov/hydra-work/scripts:/usr/local/dcmtk/3.6.0/bin:/home/ryakupov/r2_cluster_x:/home/ryakupov/cluster-work/scripts

PYTHONPATH =
R_LIBS =
LD_LIBRARY_PATH = /opt/gridengine/lib/lx-amd64:/opt/openmpi/lib:/usr/local/dcmtk/3.6.0/lib64

DYLD_LIBRARY_PATH =
DYLD_FALLBACK_LIBRARY_PATH =

------------------------------ data checks -------------------------------
data dir : missing AFNI_data6
data dir : missing AFNI_demos
data dir : missing suma_demo
data dir : missing afni_handouts
atlas    : found TT_N27+tlrc  under /share/apps/abin

------------------------------ OS specific -------------------------------
which yum            : /usr/bin/yum
yum version          : 3.4.3


=========================  summary, please fix:  =========================
*  just be aware: login shell 'bash', but our code examples use 'tcsh'
*  'afni' executable is owned by root
*  missing R packages (see rPkgsInstall)
*  python library matplotlib is required
   (see AFNI install docs for details)
*  insufficient data for AFNI bootcamp
   (see "Prepare for Bootcamp" on install pages)