Hi everyone,
My first level data has been co-registered to the standard MNI space (MNI_T1_2mm) and loads fine in MRIcroGL and FSLeyes. However, after running the 3dlme command, my result file no longer aligns well with the MNI space. Could you please help me understand what I might be doing wrong? I'm attaching the images to illustrate the problem.
Thank you in advance,
Milena
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MNI space and example 1st level file.png
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volume from 3dlme.png
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