AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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ptaylor
October 24, 2022 09:01AM
Hi-

Is that the full "afni_system_check.py -check_all" output? There should be a lot more information at the start. I can see that you are using a Mac, but I can't see what version. There are notable issues with not having XQuartz.

I think you should check the installation items for your Mac OS version here:
https://afni.nimh.nih.gov/pub/dist/doc/htmldoc/background_install/install_instructs/index.html
to make sure they are satisfactorially completed. This copy+paste item appears necessary to still be done:
[afni.nimh.nih.gov]
... and probably installing XQuartz, which is described here for Mac OS 10.*:
https://afni.nimh.nih.gov/pub/dist/doc/htmldoc/background_install/install_instructs/steps_mac.html#setup-terminal

Can you please run those, and report back with the system check output?

thanks,
pt
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Subject Author Posted

distortion and rotation of anat_final Attachments

AsyaCosmos October 18, 2022 02:51AM

Re: distortion and rotation of anat_final

ptaylor October 18, 2022 06:56AM

Re: distortion and rotation of anat_final Attachments

AsyaCosmos October 21, 2022 03:58AM

Re: distortion and rotation of anat_final

ptaylor October 21, 2022 06:14AM

Re: distortion and rotation of anat_final

AsyaCosmos October 24, 2022 08:50AM

Re: distortion and rotation of anat_final

ptaylor October 24, 2022 09:01AM

Re: distortion and rotation of anat_final

AsyaCosmos February 09, 2023 04:18AM