1.1. Install AFNI on Your Own Computer¶
- 1.1.1. Overview
- 1.1.2. Linux, Ubuntu 15.10 and earlier
- 1.1.3. Linux, Ubuntu 16.04 - 17.10
- 1.1.4. Linux, Ubuntu 18.04
- 1.1.5. Linux, Ubuntu 20.04
- Things to note before starting
- Quick setup
- (slow setup) Install prerequisite packages
- (slow setup) Install AFNI binaries
- (slow setup) Install R
- (slow setup) Prepare for Bootcamp
- (slow setup) Evaluate setup/system (important!)
- (slow setup) Niceify terminal (optional, but goood)
- (slow setup) Install extras (optional, but recommended for Bootcamp prep)
- (slow setup) Keep up-to-date (remember!)
- A note on setting up Python/using Conda (opt)
- 1.1.6. Linux, Ubuntu 22.04
- Things to note before starting
- Quick setup
- (slow setup) Install prerequisite packages
- (slow setup) Install AFNI binaries
- (slow setup) Install R
- (slow setup) Prepare for Bootcamp
- (slow setup) Evaluate setup/system (important!)
- (slow setup) Niceify terminal (optional, but goood)
- (slow setup) Install extras (optional, but recommended for Bootcamp prep)
- (slow setup) Keep up-to-date (remember!)
- A note on setting up Python/using Conda (opt)
- 1.1.7. Linux, Fedora
- Things to note before starting
- Quick setup
- (slow setup) Install prerequisite packages
- (slow setup) Install AFNI binaries
- (slow setup) Install R
- (slow setup) Prepare for Bootcamp
- (slow setup) Evaluate setup/system (important!)
- (slow setup) Niceify terminal (optional, but goood)
- (slow setup) Install extras (optional, but recommended for Bootcamp prep)
- (slow setup) Keep up-to-date (remember!)
- A note on setting up Python/using Conda (opt)
- 1.1.8. Linux, Red Hat
- 1.1.9. Mac OS, 10.9-15 (via command line)
- What to do?
- Setup terminal
- Install Xcode and XQuartz
- Setup Mac env variables
- Install AFNI binaries
- Reboot
- Install R
- Install Netpbm
- Setup Python (opt)
- Prepare for Bootcamp
- Evaluate setup/system (important!)
- Niceify terminal (optional, but goood)
- Install extras (optional, but recommended for Bootcamp prep)
- Keep up-to-date (remember!)
- Enable more SUMA keypresses (recommended)
- 1.1.10. Mac OS, 10.13-15 (via App)
- 1.1.11. macOS, 12+ (Apple Silicon: M1, M2, …)
- 1.1.12. macOS, 12+ (Intel chip)
- 1.1.13. Windows 10: Windows Subsystem for Linux (WSL)
- 1.1.14. old Windows 10: Bash on Ubuntu (beta)
- What to do?
- Notes
- Install prerequisite: “Bash on Windows”
- Install prerequisite: Xming X Server for Windows
- Install prerequisite: AFNI and package dependencies
- Useful setup tips (optional, but recommended)
- Prepare for Bootcamp
- Evaluate setup/system (important!)
- Niceify terminal (optional, but goood)
- Keep up-to-date (remember!)