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  • 6. SUMA GUI (suma)

6. SUMA GUI (suma)¶

  • 6.1. Intro
    • 6.1.1. Overview
    • 6.1.2. Highlights
  • 6.2. SUMA Viewer
    • 6.2.1. Surface Viewing
    • 6.2.2. Volume Viewing
    • 6.2.3. Tract Viewing
    • 6.2.4. Graph Viewing
    • 6.2.5. Displayable Objects
    • 6.2.6. ECOG Grid Viewing
    • 6.2.7. Mouse & Keyboard
    • 6.2.8. Color Mixing
    • 6.2.9. Alignment of Surfaces with Volumes
    • 6.2.10. The Spec File
  • 6.3. SUMA Controllers
    • 6.3.1. Overview
    • 6.3.2. Global Controller
    • 6.3.3. Object Controllers
  • 6.4. SUMA Clipping Planes
    • 6.4.1. Introduction
    • 6.4.2. Clipping plane cheatsheet
  • 6.5. Standard Meshes For Group-Level Analysis
    • 6.5.1. Overview
    • 6.5.2. Standard meshes
  • 6.6. SUMA Programming Notes
    • 6.6.1. Displayable_Objects
    • 6.6.2. Datasets
    • 6.6.3. Viewers
    • 6.6.4. States
    • 6.6.5. Overlays or Color Planes
    • 6.6.6. Picking
    • 6.6.7. For better or for worse
    • 6.6.8. Debugging Utilities
    • 6.6.9. Unfinished Worthwhile Business
    • 6.6.10. Examples (musings perhaps)

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Table of Contents

  • 1. Installation and Background
  • 2. Starting with AFNI
  • 3. Educational resources
  • 4. All program helps
  • 5. AFNI GUI (afni)
  • 6. SUMA GUI (suma)
    • 6.1. Intro
    • 6.2. SUMA Viewer
    • 6.3. SUMA Controllers
    • 6.4. SUMA Clipping Planes
    • 6.5. Standard Meshes For Group-Level Analysis
    • 6.6. SUMA Programming Notes
  • 7. FATCAT
  • 8. NIFTI
  • 9. Statistics
  • 10. Templates & Atlases
  • 11. Non-human processing
  • 12. Tutorials, Examples
  • 13. Demo Material
  • 14. Codex: AFNI Code Examples from publications
  • 15. Citations and Reference Works
  • 16. Developer Documentation
  • 17. Contributors
  • 18. Glossary
  • 19. Main AFNI pages

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