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AFNI, SUMA and FATCAT: v24.3.08
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Symbols
|
A
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B
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C
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D
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E
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F
|
G
|
H
|
I
|
L
|
M
|
N
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O
|
P
|
R
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S
|
T
|
U
|
W
Symbols
$HOME
,
[1]
,
[2]
,
[3]
,
[4]
,
[5]
,
[6]
,
[7]
,
[8]
,
[9]
,
[10]
.afnirc
.sumarc
1D
1D Dset
1D file
1D index
3D index
A
afnirc
B
B
Brightness
bundle
C
cell
color plane
color planes
CSF
D
data
Dataset column
Datasets
datum
DEC map
diagonal-first
Displayable Object
Displayable Objects
DO
DOs
Draw ROI Mode
DT
DTI
DW
DWI
E
e1
e2
e3
edge
edges
environment variable
$HOME
,
[1]
,
[2]
,
[3]
,
[4]
,
[5]
,
[6]
,
[7]
,
[8]
,
[9]
,
[10]
F
FA
Family of surfaces
flip
G
GM
H
HARDI
I
I
index
indexing
Intensity
L
L1
L2
L3
M
Mask Manipulation Mode
MD
N
network
node
,
[1]
nodes
O
olay
P
point
points
R
RAI
RD
Record Mode
Recording Mode
reference set
ROI
row-first
S
Shift+Right Click
SNR
Spec
Spec file
SRC
State
States
sub-brick
sub-bricks
subbrick
subbricks
sumarc
Surface Volume
T
T
Threshold
tract
tractography
tractography coloration
tracts
U
ulay
W
WB
WM
Table of Contents
1. Installation and Background
2. Starting with AFNI
3. Educational resources
4. All program helps
5. AFNI GUI (afni)
6. SUMA GUI (suma)
7. FATCAT
8. NIFTI
9. Statistics
10. Templates & Atlases
11. Non-human processing
12. Tutorials, Examples
13. Demo Material
14. Codex: AFNI Code Examples from publications
15. Citations and Reference Works
16. Developer Documentation
17. Contributors
18. Glossary
19. Main AFNI pages
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AFNI, SUMA and FATCAT: v24.3.08
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