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Index

Symbols | A | B | C | D | E | F | G | H | I | L | M | N | O | P | R | S | T | U | W

Symbols

  • $HOME, [1], [2], [3], [4], [5], [6], [7], [8], [9], [10]
  • .afnirc
  • .sumarc
  • 1D
  • 1D Dset
  • 1D file
  • 1D index
  • 3D index

A

  • afnirc

B

  • B
  • Brightness
  • bundle

C

  • cell
  • color plane
  • color planes
  • CSF

D

  • data
  • Dataset column
  • Datasets
  • datum
  • DEC map
  • diagonal-first
  • Displayable Object
  • Displayable Objects
  • DO
  • DOs
  • Draw ROI Mode
  • DT
  • DTI
  • DW
  • DWI

E

  • e1
  • e2
  • e3
  • edge
  • edges
  • environment variable
    • $HOME, [1], [2], [3], [4], [5], [6], [7], [8], [9], [10]

F

  • FA
  • Family of surfaces
  • flip

G

  • GM

H

  • HARDI

I

  • I
  • index
  • indexing
  • Intensity

L

  • L1
  • L2
  • L3

M

  • Mask Manipulation Mode
  • MD

N

  • network
  • node, [1]
  • nodes

O

  • olay

P

  • point
  • points

R

  • RAI
  • RD
  • Record Mode
  • Recording Mode
  • reference set
  • ROI
  • row-first

S

  • Shift+Right Click
  • SNR
  • Spec
  • Spec file
  • SRC
  • State
  • States
  • sub-brick
  • sub-bricks
  • subbrick
  • subbricks
  • sumarc
  • Surface Volume

T

  • T
  • Threshold
  • tract
  • tractography
  • tractography coloration
  • tracts

U

  • ulay

W

  • WB
  • WM

Logo

Table of Contents

  • 1. Installation and Background
  • 2. Starting with AFNI
  • 3. Educational resources
  • 4. All program helps
  • 5. AFNI GUI (afni)
  • 6. SUMA GUI (suma)
  • 7. FATCAT
  • 8. NIFTI
  • 9. Statistics
  • 10. Templates & Atlases
  • 11. Non-human processing
  • 12. Tutorials, Examples
  • 13. Demo Material
  • 14. Codex: AFNI Code Examples from publications
  • 15. Citations and Reference Works
  • 16. Developer Documentation
  • 17. Contributors
  • 18. Glossary
  • 19. Main AFNI pages

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  • AFNI, SUMA and FATCAT: v25.1.08 »
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