Thank you for these very helpful suggestions!
While I'm talking with you, I was wondering if there is a way to generate activation montage images from the command line. We typically open our output in AFNI, open a montage view, set the overlay sub-brick, set the pval, and save a jpeg for each participant. I was wondering if theres a handy AFNI command or tool that would allow us to automate this on the command line. May be a total shot in the dark.
