AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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January 15, 2023 03:38PM
Hello AFNI team,

Is there a way to output more than one coordinate per cluster in the 3dClusterize cluster report?

I'm using the whereami function to locate atlas regions on a group level cluster map. For each cluster, I use the center of mass from the cluster report as well as manually entering other coordinates into the -coord_file flag that seem to cover the extent of the cluster. Instead of manually clicking around the cluster to find additional coordinates, I was hoping there was a way to output this information per voxel.
Subject Author Posted

Multiple coordinates per cluster for cluster report

Catherine Tallman January 15, 2023 03:38PM

Re: Multiple coordinates per cluster for cluster report

ptaylor January 15, 2023 06:21PM

Re: Multiple coordinates per cluster for cluster report

Catherine Tallman January 19, 2023 12:44PM

Re: Multiple coordinates per cluster for cluster report

ptaylor January 19, 2023 04:05PM

Re: Multiple coordinates per cluster for cluster report

Christine Smith January 20, 2023 07:26PM

Re: Multiple coordinates per cluster for cluster report

ptaylor January 21, 2023 07:28AM

Re: Multiple coordinates per cluster for cluster report

Catherine Tallman January 23, 2023 01:46PM