AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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bob cox
January 12, 2004 08:45AM
Nota Bene:

You can set the environment variable AFNI_IMAGE_MINTOMAX to YES and then the min-to-max setting will be turned on by default in the image viewers.

You can set environment variable AFNI_IMAGE_GLOBALRANGE to YES to have the grayscale set to run from bottom=dataset min to top=dataset max (overriding 2%-to-98% AND min-to-max, both of which operate on a slicewise basis, not a volumewise basis).

The bad plotting in the Graymap display is because I wrote that in a hurry. A proper version would draw a better histogram, like the Histogram plugin does.

You can determine the current mapping between numerical values and grayscale by enabling hints (Datamode->Misc menu) and then putting the cursor over the grayscale bar to the right of the image subwindow.

For more information on environment variables, see the README.environment text file. You can interactively modify some variables from the Edit Environment control panel (Datamode->Misc menu, or the right-click image popup menu on recent version of AFNI). You can also set them in your ~/.afnirc file, or your shell startup file.

bob cox
Subject Author Posted

AFNI viewer bug -- invisible images

Graham Wideman January 09, 2004 02:46AM

Re: AFNI viewer bug -- invisible images

Graham Wideman January 09, 2004 03:03AM

Re: AFNI viewer bug -- invisible images

Graham Wideman January 09, 2004 03:06AM

Re: AFNI viewer bug -- invisible images

Hauke January 09, 2004 03:23AM

Re: AFNI viewer bug -- invisible images

Ziad Saad January 09, 2004 09:01AM

Re: AFNI viewer bug -- invisible images

Graham Wideman January 09, 2004 09:03PM

Re: AFNI viewer bug -- invisible images

rick reynolds January 10, 2004 11:27AM

Re: AFNI viewer bug -- invisible images

Graham Wideman January 12, 2004 06:08PM

Re: AFNI viewer bug -- invisible images

bob cox January 12, 2004 08:45AM

Re: AFNI viewer bug -- invisible images

Graham Wideman January 12, 2004 06:08PM