Good Morning
I've successfully moved the roi from the standardized SUMA brain to volumetric data (verified by viewing in AFNI). Then I've tried to put it back onto the original SUMA surface, which looks like random speckles. Do you have any idea why this is the case?
Thanks again
Jennine
The commands I've used are below:
sed 1,8d lh_insula.1D.roi > lh_insula.1D.dset
3dSurf2Vol \
-spec AM-04V_lh_std.spec \
-sv AM-04VSUMA_SurfVol_Alnd_Exp+orig \
-surf_A wm \
-surf_B pial \
-sdata_1D lh_insula_roi.dset \
-f_steps 10 \
-grid_parent AM-04VSUMA_SurfVol_Alnd_Exp+orig \
-map_func ave \
-prefix lh_insula_roi+orig
3dVol2Surf \
-spec AM-04VSUMA_lh.spec \
-sv lh_insula_roi+orig \
-surf_A lh.smoothwm \
-surf_B lh.pial \
-grid_parent AM-04VSUMA_SurfVol+orig \
-map_func max \
-f_steps 10 \
-debug 0 \
-f_index nodes \
-oob_value 0.0 \
-out_1D lh.insula.1D.dset