AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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May 16, 2005 10:25AM
Alas, I just discovered that the gamma() function in OS X computes the actual Gamma function, not the natural log, like the one I grew up with does (and the one on other Unix systems). This means that the version of AFNI you just compiled will not compute the 'p' value of t or correlation statistics correctly.

I have modified the AFNI source code distribution (and OS X Makefiles) along the lines of what the earlier discussion indicated. I have also fixed the use of gamma() to lgamma(), which seems to be the more portable way to get ln(Gamma(x)).

I also think I fixed the problem with 3dDeconvolve_f, but can't be sure since I don't have the problem here that you had. You can at least give it a try.

If you download and use Makefile.macosx_10.3 or Makefile.macosx_10.3_G5, you should have less trouble now. (You'll probably still need to do something to get the Motif library you compiled to link in.) I won't have a Makefile.macosx_10.4 until I get Tiger myself.
Subject Author Posted

AFNI running under OS X 10.4 Tiger?

Frank Haist May 14, 2005 04:06AM

Re: AFNI running under OS X 10.4 Tiger?

Bob Cox May 14, 2005 06:25AM

Re: AFNI running under OS X 10.4 Tiger?

Frank Haist May 14, 2005 01:46PM

Re: AFNI running under OS X 10.4 Tiger?

Bob Cox May 14, 2005 05:53PM

Re: AFNI running under OS X 10.4 Tiger?

Bob Cox May 14, 2005 09:20PM

Re: AFNI running under OS X 10.4 Tiger?

Frank Haist May 15, 2005 02:07AM

Re: AFNI running under OS X 10.4 Tiger?

Bob Cox May 15, 2005 11:06AM

Re: AFNI running under OS X 10.4 Tiger?

Frank Haist May 15, 2005 01:29PM

Re: AFNI running under OS X 10.4 Tiger?

Bob Cox May 15, 2005 07:02PM

Re: AFNI running under OS X 10.4 Tiger?

Frank Haist May 15, 2005 10:37PM

Changes for Tiger

Robert Cox May 16, 2005 10:25AM

Re: Changes for Tiger

Frank Haist May 16, 2005 11:56AM

Re: Changes for Tiger

Frank Haist May 17, 2005 02:23AM

Re: Apparent success with Changes for Tiger

Frank Haist May 17, 2005 12:34PM