AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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Gang Chen
October 26, 2005 03:52PM
Each event in your design lasts 3 seconds, e.g., 1.5 TR's. Your stimulus coding would not work. There are a couple of solutions to coding your stimuli. You can use -stim_file combined with -stim_nptr in 3dDeconvolve. Read the manual about the details of -stim_nptr.

Or use -stim_times by providing the stimulus beginning time of each event in file tname with the following format:

-stim_times k tname 'BLOCK(d,p)'

Read the following link for instructions:

http://afni.nimh.nih.gov/afni/doc/misc/3dDeconvolveSummer2004/

Gang
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Subject Author Posted

Stim File setup

Jatin October 26, 2005 12:04PM

Re: Stim File setup

Gang Chen October 26, 2005 03:52PM

Re: Stim File setup

Jatin October 27, 2005 01:06AM

Re: Stim File setup

Gang Chen October 27, 2005 11:49AM

Re: Stim File setup

Jatin October 27, 2005 03:04PM

Re: Stim File setup

Gang Chen October 27, 2005 04:07PM

Re: Stim File setup

Jatin October 27, 2005 04:53PM