AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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November 22, 2005 05:48PM
As far as I can recall, nothing was modified in AlphaSim for a long period of time.

A couple of things you can check:

(1) Is the mask auto.mask.di3.obs.012+orig still the same as before?

(2) In your script AlphaSim -nx 64 -ny 64 -nz 29 -dx 3.75 -dy 3.75 -dz 5.00 -iter 1000 -rmm 5.2 -pthr 9e-06 -fwhmx 23.11 -fwhmy 27.63 -fwhmz 20.58 -mask auto.mask.di3.obs.012+orig. -out Significant9e-06rad5.2.with.fwhm.and.mask, it seems -nx 64 -ny 64 -nz 29 -dx 3.75 -dy 3.75 -dz 5.00 is redundant (or conflicting?) because the program can get dimensions and voxel resolution from your mask.

Gang
Subject Author Posted

different AlphaSim output

nameeta November 22, 2005 04:26PM

Re: different AlphaSim output

Gang Chen November 22, 2005 05:48PM

Re: different AlphaSim output

nameeta November 23, 2005 10:14AM