Here's the script: I actually got the .mat files to input correctly as they are 117 digits long... however, my 1D stim files don't seem to be working. I have 4 runs of 280 frames each for 1120 total; my stim files are currently 1120 digits long; when I run this script I get the message
3dDeconvolve Error: Input stimulus time series file mleftleftde.1D is too short
currently the 1D file is essentially 0's and 1's with 1's when my stims are presented. Any ideas?
3dDeconvolve \
-input K_all+orig.BRIK -concat new_concat.1D -censor kevin_censor.1D \
-num_stimts 9 \
-stim_file 1 mleftleftde.1D -stim_label 1 mll -stim_minlag 1 0 -stim_maxlag 1 12 -stim_nptr 1 2\
-stim_file 2 mleftrightde.1D -stim_label 2 mlr -stim_minlag 1 0 -stim_maxlag 2 12 -stim_nptr 2 2\
-stim_file 3 mrightleftde.1D -stim_label 3 mrl -stim_minlag 1 0 -stim_maxlag 3 12 -stim_nptr 3 2\
-stim_file 4 mrightrightde.1D -stim_label 4 mrr -stim_minlag 1 0 -stim_maxlag 4 12 -stim_nptr 4 2\
-stim_file 5 sleftleftde.1D -stim_label 5 sll -stim_minlag 1 0 -stim_maxlag 5 12 -stim_nptr 5 2\
-stim_file 6 sleftrightde.1D -stim_label 6 slr -stim_minlag 1 0 -stim_maxlag 6 12 -stim_nptr 6 2\
-stim_file 7 srightleftde.1D -stim_label 7 srl -stim_minlag 1 0 -stim_maxlag 7 12 -stim_nptr 7 2\
-stim_file 8 srightrightde.1D -stim_label 8 srr -stim_minlag 1 0 -stim_maxlag 8 12 -stim_nptr 8 2\
-stim_file 9 diffuse.1D -stim_label 9 diffuse \
-glt 1 motiondiff.mat -glt 1 statdiff.mat -glt 1 motionsame.mat -glt 1 statsame.mat -glt 1 motionvsstat.mat -glt 1 diffvssame.mat \
-glt_label 1 motdiff -glt_label 2 statdiff -glt_label 3 motsame -glt_label 4 statsame -glt_label 5 motvsstat -glt_label 6 diffvssame \
-iresp 1 MDirf -iresp 2 MSirf -iresp 3 SDirf -iresp 4 SSirf \
-full_first -fout -tout -nobout -polort 2 -bucket stats_K_NEWEST