Dear Ziad,
I ran the commands for the MP and it seems to haved correct.
But the EPI ones failed. I have the same WARNING as stated in the previous post and this error afterwards:
Skull Stripping ...
Error SUMA_LoadPrepInVol (SUMA_BrainWrap.c:89):
98 percentile is 0!
What kind of dataset is this?
Error 3dSkullStrip (SUMA_3dSkullStrip.c:1438):
Failed to load/prep volume
Error: Failed to create skull stripped brain
These must a simple step that I'm missing somewhere...but I can't see it!!
DO you have any idea?