AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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Ziad
February 06, 2008 03:49PM
Clare wrote:

> Hi there,
>
> I'm trying to use SUMA to create some figures.. I'm using: suma
> -spec N27_rh_tlrc.spec -sv TT_N27+tlrc. -niml &
>
> It works fine for the first functional I load, but when I
> switch overlay the surface outline disappears from the afni
> image viewer windows and SUMA will no longer update (in any
> way).
>
> The only error that gets printed to screen when this happens
> is: Can't find anat parent .... of TT_N27+tlrc.HEAD, though
> when I'm opening SUMA, I do get several error messages
> including:
The messages you are getting are of mixed source. Some are afni's and some a re suma's. Also, note that warnings and notices are not errors and you need not worry about them in this case.
One way to separate error sources would be to run AFNI and SUMA from different terminals.

this message:
>
> received too many surfaces for LDP 'rh.smoothwm.tlrc.ply (via
> SAME)'
> using surf #0 : rh.smoothwm.tlrc.ply
> using surf #1 : rh.pial.tlrc.ply
> ignoring surf #2 : rh.white.tlrc.ply
tells you that surfaces smoothwm and pial will be used by the vol2surf plugin for mapping data onto the surface.

What does ls *tlrc.HEAD return in the afni directory?

cheers,
ziad
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Subject Author Posted

SUMA overlay won't update

Clare February 06, 2008 02:35PM

Re: SUMA overlay won't update

Ziad February 06, 2008 03:49PM

Re: SUMA overlay won't update

Clare February 06, 2008 06:01PM

Re: SUMA overlay won't update

Clare February 07, 2008 03:36PM