AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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November 03, 2008 04:59PM
I'm running an event-related context-dependent correlation analysis and I've gotten up to running 3dTfitter according to Gang's web page. I'm a little lost at this point. The webpage states:

"The interaction at neuronal level can be represented by the pair-wise product between the event timing file in 0s and 1s and the seed response, Neuron.1D,"

1deval -a AvsBcoding.1D -b NeuronCondAndCondB -expr 'a*b' > NR_AvsB.1D

I'm not sure where the Neuron.1D file came from. Is it supposed to be the output from 3dTfitter? Additionally, in the 1deval line, does the NeuronCondAndCondB refer to the output from 3dTfitter?

That's what I thought, but I'm getting an error message:
** Time series file Str4andRefNeuronal_LftCaudate.1D is too short!

Any help would be appreciated.

Thanks,
Aaron
Subject Author Posted

Context-dependent correlation - Help

Aaron Mattfeld November 03, 2008 04:59PM

Re: Context-dependent correlation - Help

Gang Chen November 05, 2008 09:01AM

Re: Context-dependent correlation - Help

Aaron Mattfeld November 06, 2008 04:59PM

Re: Context-dependent correlation - Help

Gang Chen November 10, 2008 09:01AM

Re: Context-dependent correlation - Help

Aaron Mattfeld November 10, 2008 12:30PM