Hi Gang,
I need to convert a statistical map from afni to nifti to import it in mricron. That map, however, is one contrast from my ANOVA analysis. How do I extract and convert to nifti only that specific subbrick?
You suggested
If the sub-brick number is 5, try 3dAFNItoNIFTI -prefix myOutput myInput+tlrc'[5]'
Unfortunately it did not work. The procedure creates a nii file, but when I import it in mricron it is all blurred, as if it could not overlap it properly on the template. Any other suggestion?
Thanks a lot,
Elisa