AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

|
February 23, 2010 02:44AM
Ya, I run another subject, and find there is no meaningful pattern when I choose target-to-seed.
But there is only positive prediction when I choose seed-to-target, is it normal?
And another question, I seperate my 3 condiotns: face, object, and flobject, but I find the 3dGC.R results(activation pattern) are quit similar. It back to the conclusion that 3dSynthesize can't truly seperate those conditions....
I think, If I run 3dDdeconvolve and use only 1 stim_file(I put commands below), then the output contains only 1 condition, right? Can I use this method?

3dDeconvolve \
-input xxx+orig \
-mask xx_mask+orig \
-censor censor.1D \
-polort 3 \
-concat start_points.1D \
-num_stimts 7 \
-stim_file 1 Face_wav.1D \
-stim_label 1 Face \
-stim_file 2 xx.1D'[0]' -stim_base 2 -stim_label 2 roll \
-stim_file 3 xx.1D'[1]' -stim_base 3 -stim_label 3 pitch \
-stim_file 4 xx.1D'[2]' -stim_base 4 -stim_label 4 yaw \
-stim_file 5 xx.1D'[3]' -stim_base 5 -stim_label 5 dS \
-stim_file 6 xx.1D'[4]' -stim_base 6 -stim_label 6 dL \
-stim_file 7 xx.1D'[5]' -stim_base 7 -stim_label 7 dP \
-fitts xx_face_fitts \
-bucket xx_face_bucket \
-cbucket xx_face_cbucket \
-GOFORIT 3 \
-tout \
-xjpeg xmat_xx.jpg \
-x1D xmat_xx.x1D


Jingle
Subject Author Posted

3dGC.R questions

Jingle December 01, 2009 04:52AM

Re: 3dGC.R questions

Gang Chen December 01, 2009 11:55AM

Re: 3dGC.R questions

Jingle December 02, 2009 02:10AM

Re: 3dGC.R questions

Jingle December 07, 2009 01:53AM

Re: 3dGC.R questions

Gang Chen December 07, 2009 05:38PM

Re: 3dGC.R questions

Jingle December 08, 2009 02:33AM

Re: 3dGC.R questions

Jingle December 15, 2009 02:24AM

Re: 3dGC.R questions

Jingle January 12, 2010 10:19AM

Re: 3dGC.R questions

Gang Chen January 12, 2010 03:44PM

Re: 3dGC.R questions

Chun-Chia January 21, 2010 02:13AM

Re: 3dGC.R questions

Gang Chen January 21, 2010 05:46PM

Re: 3dGC.R questions

Jingle February 20, 2010 02:50AM

Re: 3dGC.R questions

Gang Chen February 21, 2010 04:14PM

Re: 3dGC.R questions

Jingle February 23, 2010 02:44AM

Re: 3dGC.R questions

Jingle February 24, 2010 02:47AM

stim_times

Jingle March 08, 2010 02:33AM

3dGC.R group analysis

Matt April 04, 2010 10:08AM

Re: 3dGC.R group analysis

Gang Chen April 05, 2010 09:29AM

Re: 3dGC.R group analysis

Matt April 05, 2010 07:50PM