AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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January 15, 2014 04:46AM
Hi Ziad,

I have checked again, my subject directory contains all the sub directories and files that you mentioned above but for some reason they didn't copied in last email body here are the contents of the /mri directory

UN:~/CHR01/mri> ls
aparc.a2009s+aseg.mgz orig
aparc+aseg.mgz orig.mgz
aseg.auto.mgz orig_nu.log
aseg.auto_noCCseg.label_intensities.txt orig_nu.mgz
aseg.auto_noCCseg.mgz rawavg.mgz
aseg.mgz rh.ribbon.mgz
brain.finalsurfs.mgz ribbon.mgz
brainmask.auto.mgz segment.dat
brainmask.mgz T1.mgz
brain.mgz talairach.label_intensities.txt
ctrl_pts.mgz talairach.log
error.log talairach_with_skull_2.log
filled.mgz talairach_with_skull.log
lh.ribbon.mgz transforms
mri_nu_correct.mni.log wm.asegedit.mgz
mri_nu_correct.mni.log.bak wm.mgz
norm.mgz wmparc.mgz
nu.mgz wm.seg.mgz
nu_noneck.mgz
UN:~/CHR01/mri>

waiting for your reply

Best Regards
Naveed
Subject Author Posted

Analyzing freesurfer cortical thickness maps in AFNI

Courtney Gallen December 23, 2010 10:25AM

Re: Analyzing freesurfer cortical thickness maps in AFNI

rick reynolds December 23, 2010 12:16PM

loading .thickness files of T1 MRI from FreeSurfer into AFNI

Naveed January 06, 2014 02:16AM

Re: loading .thickness files of T1 MRI from FreeSurfer into AFNI

Peter Molfese January 06, 2014 04:15AM

Re: loading .thickness files of T1 MRI from FreeSurfer into AFNI

Naveed January 07, 2014 03:07AM

Re: loading .thickness files of T1 MRI from FreeSurfer into AFNI

ziad January 06, 2014 10:00AM

Re: loading .thickness files of T1 MRI from FreeSurfer into AFNI

Naveed January 07, 2014 03:06AM

Re: loading .thickness files of T1 MRI from FreeSurfer into AFNI

ziad January 07, 2014 09:31AM

Re: loading .thickness files of T1 MRI from FreeSurfer into AFNI

Naveed January 07, 2014 07:53PM

Re: loading .thickness files of T1 MRI from FreeSurfer into AFNI

ziad January 09, 2014 12:43PM

Re: loading .thickness files of T1 MRI from FreeSurfer into AFNI

Naveed January 15, 2014 04:46AM

Re: Analyzing freesurfer cortical thickness maps in AFNI

Kristina Simonyan January 03, 2011 03:48PM

Re: Analyzing freesurfer cortical thickness maps in AFNI

Naveed January 07, 2014 06:46AM