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Dear AFNI users-
We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:
https://discuss.afni.nimh.nih.gov
Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.
The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.
Sincerely,
AFNI HQ
History of AFNI updates
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Many thanks again Rick for creating these updates and fixing this so quick!
All the best,
by
Claudie Gaillard
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AFNI Message Board
Hi Rick,
I set the environment variable after having installed XQuartz and it seems that abin was well added to my path. However, the libXp files cannot be found and I don't know exactly from where comes the issue and how to fix this.
A zoom meeting would certainly be very helpful to figure out where does this issue stem from.
Thanks a lot for the help with this issue!
All the bes
by
Claudie Gaillard
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AFNI Message Board
Hi Rick,
Thanks again for helping with this issue.
I uninstalled XQuartz and reinstalled it (version 2.8.0). The libXp files are still not found. When running 'suma -update_env', here is what I get:
bash-3.2$ suma -update_env
dyld: Library not loaded: /opt/X11/lib/libXp.6.dylib
Referenced from: /Users/claudie/abin/suma
Reason: image not found
Abort trap: 6
Of note,
by
Claudie Gaillard
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AFNI Message Board
Hi Rick,
I installed XQuartz and R with the default location suggested during the installation process. I don't know exactly why it cannot be found via the Terminal. Please find below the output from the ls -ld /opt/X11/lib/libXp.* command.
bash-3.2$ ls -ld /opt/X11/lib/libXp.*
ls: /opt/X11/lib/libXp.*: No such file or directory
Out of curiosity, would it be recommended to update t
by
Claudie Gaillard
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AFNI Message Board
Hi Rick,
Many thanks for getting back regarding this issue. I am using a M1 mac with macOS Big Sur (version 11.2) installed.
I rebooted my machine after running the command below:
cp $HOME/abin/AFNI.afnirc $HOME/.afnirc
suma -update_env
Of note, I did not run the curl command. Therefore, I am wondering whether it might have something to do with this.
Concerning XQuartz and R, I d
by
Claudie Gaillard
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AFNI Message Board
Hi AFNI support team,
I take the liberty of reaching out regarding an issue that I am facing when trying to install AFNI on my new machine under macOS Bis Sur (version 11.2). I have followed carefully each step described here "1.1.7. Mac OS" and after reviewing the message board for some hints about how to fix these issues, I am still stuck.
First, I got a message error at the st
by
Claudie Gaillard
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AFNI Message Board
Hi Rick,
Thanks a lot for your precious guidance ! I run the command that you recommended me and indeed, it found a very 'basic' typo error.
Everything went then perfectly once I could correct for it.
Just a last question about how to interpret correctly the map that I got with the inclusion of the covariates. If I select a contrast with one of my covariate, let's say the B
by
Claudie Gaillard
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AFNI Message Board
Dear AFNI experts,
I take the liberty of writing you regarding some trouble I'm encountering with my 3dttest++ script. I would like to perform a 3dttest++ to investigate the effect of self-reported variables (quantitative measures evaluated with self-reported questionnaires) on functional connectivity among healthy subjects for one specific ROI.
Currently I'm getting an error messag
by
Claudie Gaillard
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AFNI Message Board