AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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December 05, 2012 12:04PM
Hi John,

How did you do the sorting, or were the files already sorted
by volume and then slice location?

It is a little strange that you needed to use 3dresample to
fix the -dicom_org dataset, which suggests there is some
obliquity matrix that is inverted against the -dicom_org
slice ordering. But that suggests that the ordering from
the header is not actually correct, but the alphabetical
one is.

In any case, it sounds like the scanner is saving the files in
the correct order, though the DICOM fields are not populated
for correct sorting by Dimon.

- rick
Subject Author Posted

Problematic dimon files

John November 16, 2012 04:25PM

Re: Problematic dimon files

John November 26, 2012 01:16PM

Re: Problematic dimon files

rick reynolds November 26, 2012 09:42PM

Re: Problematic dimon files

John November 28, 2012 12:03PM

Re: Problematic dimon files

John Graner December 03, 2012 01:09PM

Re: Problematic dimon files

rick reynolds December 03, 2012 02:02PM

Re: Problematic dimon files

John Graner December 04, 2012 11:27AM

Re: Problematic dimon files

rick reynolds December 05, 2012 12:04PM

Re: Problematic dimon files

John Graner December 05, 2012 04:16PM