afni.nimh.nih.gov

Dear all,

I am preprocessing a large batch of subjects and with some subjects the registration is significantly off. I am looking into manually reorienting the images (setting origin, possible rotating..etc) in a similar way that can be done in SPM. I am not sure if this option is available in AFNI. I tried to do it in SPM and have AFNI read the image but it doesn't seem it is reading the header file correctly.

Regards,
George