AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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Doughboys
February 20, 2020 06:05PM
Hi --pt,

Thank you, I don't think that it is going to work because in the previous pipeline we already align the center of these two images.
I think that the problem comes from the fact that the two images do not overlay.
Probably, when we apply the transformation parameters, they can't be accurate anymore because the orientation of the two brains is different.
The non-overlay of the two images is the only difference with the previous cohort, that's why I think that it might come from that?
Is there a way to change the orientation to overlay like in the viewer?
Sry if I am not enough precise,
Tks



Edited 1 time(s). Last edit at 02/20/2020 06:07PM by Doughboys.
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Subject Author Posted

2 images in the same space

Doughboys February 20, 2020 04:50PM

Re: 2 images in the same space

ptaylor February 20, 2020 05:16PM

Re: 2 images in the same space

Doughboys February 20, 2020 05:35PM

Re: 2 images in the same space

ptaylor February 20, 2020 05:50PM

Re: 2 images in the same space

Doughboys February 20, 2020 06:05PM

Re: 2 images in the same space

ptaylor February 20, 2020 06:25PM

Re: 2 images in the same space

Doughboys February 20, 2020 07:10PM

Re: 2 images in the same space

ptaylor February 21, 2020 06:24AM

Re: 2 images in the same space

Doughboys February 21, 2020 10:38AM

Re: 2 images in the same space

Doughboys February 26, 2020 10:01AM