AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

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Doughboys
February 20, 2020 07:10PM
Hi again,
sry I am probably not clear at all and I hope that I am not looking in the wrong direction.
The result from your previous command is:
anat
RAI -61.685852 65.814148 -30.202454 97.297546 7.62584587.125847 anatT1.nii.gz
func
RAI -62.152084 63.847916 -21.139194 104.861847 -6.759480 55.241032 BOLD_restingstate.nii.gz

after tranfo:
RAI -62.152084 63.847916 -21.139194 104.861847 -6.759480 55.241032 BOLD_restingstate_anatorig.nii.gz

To illustrate:
anat
[ibb.co]
func
[ibb.co]
anat_and func
[ibb.co]

I am wondering if the difference of FOV will be considered as two images in different spaces after we change their center coordinate. Could it be the reason why afni_proc.py fail especially on these animals?
Thank you!



Edited 3 time(s). Last edit at 02/20/2020 07:14PM by Doughboys.
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Subject Author Posted

2 images in the same space

Doughboys February 20, 2020 04:50PM

Re: 2 images in the same space

ptaylor February 20, 2020 05:16PM

Re: 2 images in the same space

Doughboys February 20, 2020 05:35PM

Re: 2 images in the same space

ptaylor February 20, 2020 05:50PM

Re: 2 images in the same space

Doughboys February 20, 2020 06:05PM

Re: 2 images in the same space

ptaylor February 20, 2020 06:25PM

Re: 2 images in the same space

Doughboys February 20, 2020 07:10PM

Re: 2 images in the same space

ptaylor February 21, 2020 06:24AM

Re: 2 images in the same space

Doughboys February 21, 2020 10:38AM

Re: 2 images in the same space

Doughboys February 26, 2020 10:01AM