Hi all,
I have resting state data from a group of subjects for whom I run uber_subject.py. Now I'm running afni_restproc.py, using the file errts.sub.tproject+tlrc. that results from uber_subject.py.
The script works for many of my subjects (the majority of them), but there is a problem with some subjects that I don't know how to interpret. Here's the first error message that appears:
** ERROR: Could not strip skull
** ERROR - script failed
INFO: Remove first TRs from EPI, motion params, and any user supplied regressors
++ 3dTcat: AFNI version=AFNI_19.2.26 (Sep 24 2019) [64-bit]
++ elapsed time = 12.0 s
INFO: Extract brain mask
++ 3dAutomask: AFNI version=AFNI_19.2.26 (Sep 24 2019) [64-bit]
++ Authored by: Emperor Zhark
** FATAL ERROR: Can't open dataset 'anat_w_skull_warped_al+tlrc'
Does anybody know what the problem could be? Thanks,
Ana
