History of AFNI updates  

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October 12, 2020 11:06PM
OK, you managed to fix the data.table issue!

Is this your 3dLME script?

3dLME -prefix 3dLME_v1 \
-model "reward*punishment*grade" \
-resid grade_resids \
-ranEff '~1+grade_c' \
-SS_type 3 \
-qVars "grade_c" \
-qVarsCenters "0,0" \
-mask \
-num_glf 1 \
-glfLabel 1 'Ant_grade' -glfCode 1 'Ant : 1*rew & 1*pun grade_c :' \
-dataTable \
Subj	Ant	grade_c	age	wave	Inputfile \

There are at least three issues:

** Where are the three variables reward, punishment and grade in the table?
** The variable "grade_c" is declared as a quantitative variables, but why are two center values provided through -qVarsCenters "0,0"?
** In the coding -glfCode 1 'Ant : 1*rew & 1*pun grade_c :', the variable "rew" is not a column in the table, and all the three variables are not in the model formulation either.

Gang
Subject Author Posted

error with R_io.so when checking afni_system_check.py -check_all to run run 3dLME

jef October 09, 2020 08:26AM

Re: error with R_io.so when checking afni_system_check.py -check_all to run run 3dLME

ptaylor October 09, 2020 09:16AM

Re: error with R_io.so when checking afni_system_check.py -check_all to run run 3dLME

jef October 12, 2020 10:40AM

Re: error with R_io.so when checking afni_system_check.py -check_all to run run 3dLME

ptaylor October 12, 2020 01:21PM

Re: error with R_io.so when checking afni_system_check.py -check_all to run run 3dLME

jef October 12, 2020 06:55PM

Re: error with R_io.so when checking afni_system_check.py -check_all to run run 3dLME

gang October 12, 2020 07:16PM

Re: error with R_io.so when checking afni_system_check.py -check_all to run run 3dLME

jef October 12, 2020 08:40PM

Re: error with R_io.so when checking afni_system_check.py -check_all to run run 3dLME

gang October 12, 2020 11:06PM

Re: error with R_io.so when checking afni_system_check.py -check_all to run run 3dLME

jef October 13, 2020 10:13AM

Re: error with R_io.so when checking afni_system_check.py -check_all to run run 3dLME

jef October 13, 2020 10:42AM

Re: error with R_io.so when checking afni_system_check.py -check_all to run run 3dLME

gang October 13, 2020 11:13AM

Re: error with R_io.so when checking afni_system_check.py -check_all to run run 3dLME

jef October 14, 2020 09:06AM

Re: error with R_io.so when checking afni_system_check.py -check_all to run run 3dLME

gang October 14, 2020 11:53AM

Re: error with R_io.so when checking afni_system_check.py -check_all to run run 3dLME

jef October 15, 2020 10:55AM

Re: error with R_io.so when checking afni_system_check.py -check_all to run run 3dLME

rick reynolds October 19, 2020 11:11AM

Re: error with R_io.so when checking afni_system_check.py -check_all to run run 3dLME

jef October 21, 2020 11:25AM