AFNI Message Board

History of AFNI updates  

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April 11, 2022 05:01PM
AFNI should be showing all the volumetric files in "tlrc view", which refers to the data being in a standard space. You can see what space and what "afni view" a dataset is with this command

3dinfo -info -av_space mydset.nii.gz

The same command can be applied to many datasets at one time like this:

3dinfo -space -av_space -prefix ~/abin/HaskinsPeds_*.HEAD
HaskinsPeds +tlrc HaskinsPeds_NL_atlas1.0
HaskinsPeds +tlrc HaskinsPeds_NL_template1.0
HaskinsPeds +tlrc HaskinsPeds_aff_atlas1.0
HaskinsPeds +tlrc HaskinsPeds_aff_template1.0

To apply the HaskinsPeds space to a dataset like the datasets produced by FreeSurfer, you can change the space of a dataset with

3drefit -space HaskinsPeds mydset.nii.gz
Subject Author Posted

HaskinsPed .spec file for SUMA

aclynn11 April 11, 2022 04:29PM

Re: HaskinsPed .spec file for SUMA

Daniel Glen April 11, 2022 05:01PM

Re: HaskinsPed .spec file for SUMA

aclynn11 April 12, 2022 02:30PM

Re: HaskinsPed .spec file for SUMA

Daniel Glen April 12, 2022 07:35PM

Re: HaskinsPed .spec file for SUMA Attachments

aclynn11 April 13, 2022 10:35AM

Re: HaskinsPed .spec file for SUMA

Daniel Glen April 13, 2022 01:52PM

Re: HaskinsPed .spec file for SUMA

aclynn11 April 13, 2022 02:16PM

Re: HaskinsPed .spec file for SUMA

aclynn11 April 13, 2022 02:26PM

Re: HaskinsPed .spec file for SUMA

Daniel Glen April 15, 2022 09:50PM

Re: HaskinsPed .spec file for SUMA Attachments

aclynn11 April 19, 2022 03:31PM



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