afni.nimh.nih.gov
AFNI Message Board
Dear AFNI users-
We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:
Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.
The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.
Sincerely, AFNI HQ
We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:
https://discuss.afni.nimh.nih.gov
Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.
The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.
Sincerely, AFNI HQ
| March 25, 2004 10:05AM | |
Hi again!
It´s always amazing, that so many people have time and are willing to help someone!
As an "in-between" result i found out, that i have no problems converting the images if I reslize the meanEPI to eg 256³ 1mm³ and then coregister and reslize my anatomical image with SPM to the EPI. And afterwards build my surfaces with the new anatomical dataset. (Should have tried this first
But it would still be good to know how I can view/convert my datasets correctly, if I haven´t done this before. As stupid as I am I first prepared 5 surfaces/datasets before I tried to overlay the maps and found out that my old method doesn´t work anymore.
I tried reslicing my functional data with SPM/Matlab but there the problem is, that i get due to the interpolation large gaps between my functional areas although they have to contact each other.
Hope this all gets soon easier, when the NIfTI-1 is used by all groups. At least it´s said, that SPM, freesurfer and AFNI will use/support it and these are all of the programs i use
(I upped the datasets as KayBente.zip)
regards & many thanks
Kay
It´s always amazing, that so many people have time and are willing to help someone!
As an "in-between" result i found out, that i have no problems converting the images if I reslize the meanEPI to eg 256³ 1mm³ and then coregister and reslize my anatomical image with SPM to the EPI. And afterwards build my surfaces with the new anatomical dataset. (Should have tried this first
But it would still be good to know how I can view/convert my datasets correctly, if I haven´t done this before. As stupid as I am
I first prepared 5 surfaces/datasets before I tried to overlay the maps and found out that my old method doesn´t work anymore.I tried reslicing my functional data with SPM/Matlab but there the problem is, that i get due to the interpolation large gaps between my functional areas although they have to contact each other.
Hope this all gets soon easier, when the NIfTI-1 is used by all groups. At least it´s said, that SPM, freesurfer and AFNI will use/support it and these are all of the programs i use
(I upped the datasets as KayBente.zip)
regards & many thanks
Kay
| Subject | Author | Posted |
|---|---|---|
|
Kay Bente | March 23, 2004 10:02AM |
|
Ziad Saad | March 23, 2004 11:31PM |
|
Kay Bente | March 24, 2004 05:10AM |
|
Ziad S. Saad | March 24, 2004 09:24AM |
|
Donna Hanlon | March 24, 2004 09:32AM |
|
rich hammett | March 24, 2004 02:34PM |
|
Ziad Saad | March 24, 2004 09:21PM |
|
Kay Bente | March 25, 2004 10:05AM |
