AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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February 11, 2005 04:40PM
I'm finding that for some runs in some subjects, after I normalize relative to the voxel mean, as described in howto # 5, I get wildly varying signal changes in my most inferior slice. Whereas voxels elsewhere in my datasets typically have values within a percentage point or two of the voxel mean (100), the signal in voxels contained in the most inferior slice are all over the place (e.g., a minimum of 79 and a peak of 594 in one voxel for one subject). How typical is this? Is this just some sort of motion artifact? Should I just discard this slice in all subjects? I can provide data and the scripts used for normalization if this isn't something others have encountered.

Thanks!

Phil
Subject Author Posted

normalization and inferior slices

Phil Burton February 11, 2005 04:40PM

Re: normalization and inferior slices

Robert Cox February 14, 2005 11:19AM

Two more questions

Phil Burton February 14, 2005 01:01PM

Re: Two more questions

Robert Cox February 14, 2005 03:03PM

Re: normalization and inferior slices

rick reynolds February 14, 2005 04:32PM

Re: normalization and inferior slices

Phil Burton February 14, 2005 06:40PM

Re: normalization and inferior slices

rick reynolds February 15, 2005 10:56AM

Re: normalization and inferior slices

Phil Burton February 15, 2005 11:54AM

Re: normalization and inferior slices

rick reynolds February 15, 2005 12:04PM

Re: normalization and inferior slices

Phil Burton February 15, 2005 12:14PM

Re: normalization and inferior slices

rick reynolds February 15, 2005 01:39PM

Re: normalization and inferior slices

Phil Burton February 15, 2005 05:03PM