History of AFNI updates  

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September 12, 2008 02:47PM
AFNI can write NIfTI datasets, but the Talairach tranformation
involves writing only the .HEAD file first, which cannot be done
with a .nii dataset.

So convert it to AFNI format for that operation. You can convert
back to NIfTI afterwards:

> 3dcopy s03-2.3danat_flip_brain.nii.gz s03-2.3danat_flip_brain

That will make the .HEAD/.BRIK pair.

On a related note, what is the sform code of that dataset?

> nifti_tool -disp_hdr -field sform_code -infiles s03-2.3danat_flip_brain.nii.gz

- rick

Subject Author Posted

MNI Atlas tools

Anastasia Ford September 11, 2008 12:30PM

Re: MNI Atlas tools

rick reynolds September 11, 2008 02:10PM

Re: MNI Atlas tools

Anastasia Ford September 12, 2008 12:31PM

Re: MNI Atlas tools

rick reynolds September 12, 2008 01:10PM

Re: MNI Atlas tools

Anastasia Ford September 12, 2008 02:19PM

Re: MNI Atlas tools

rick reynolds September 12, 2008 02:47PM

Re: MNI Atlas tools

Anastasia Ford September 12, 2008 03:12PM

Re: MNI Atlas tools

rick reynolds September 12, 2008 04:21PM

Re: MNI Atlas tools

Anastasia Ford September 15, 2008 12:33PM

Re: MNI Atlas tools

Anastasia Ford September 15, 2008 01:19PM

Re: MNI Atlas tools

rick reynolds September 15, 2008 03:08PM

Re: MNI Atlas tools

Anastasia Ford September 16, 2008 12:40PM

Re: MNI Atlas tools

rick reynolds September 16, 2008 12:57PM

Re: MNI Atlas tools

Anastasia Ford September 18, 2008 12:11PM

Re: MNI Atlas tools

Kate Fissell October 30, 2008 02:25PM

Re: MNI Atlas tools

rick reynolds October 30, 2008 04:06PM

Re: MNI Atlas tools

Daniel Glen October 30, 2008 05:10PM

Re: MNI Atlas tools

Brent July 10, 2009 10:48AM

Re: MNI Atlas tools

Brent July 10, 2009 11:26AM

Re: MNI Atlas tools

Daniel Glen July 10, 2009 12:11PM

Re: MNI Atlas tools

Brent July 10, 2009 02:33PM