History of AFNI updates  

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October 30, 2008 02:25PM
Hi Rick,

We had the same issue, and used your 3dfractionize method,
and that appeared to work fine for us too. Thanks !
Why does the 3dfractionize help message say (under -preserve flag)
** Combining this with the -warp option does NOT
make a general +tlrc to +orig transformer!
This is because for any value to survive the
vote, its fraction in the output voxel must be
>= clip fraction, regardless of other values
present in the output voxel.

Actually, a general +tlrc to +orig transform is exactly what we are
looking for. I understand there will always be interpolation issues
in regridding, and that is what I thought the -clip was about.
I just want to be sure that when I call 3dfractionize
with -warp it is really implementing an inverse of the orig->tlrc warp,
and not just resampling to the -template gridsize.

thanks
Kate
Subject Author Posted

MNI Atlas tools

Anastasia Ford September 11, 2008 12:30PM

Re: MNI Atlas tools

rick reynolds September 11, 2008 02:10PM

Re: MNI Atlas tools

Anastasia Ford September 12, 2008 12:31PM

Re: MNI Atlas tools

rick reynolds September 12, 2008 01:10PM

Re: MNI Atlas tools

Anastasia Ford September 12, 2008 02:19PM

Re: MNI Atlas tools

rick reynolds September 12, 2008 02:47PM

Re: MNI Atlas tools

Anastasia Ford September 12, 2008 03:12PM

Re: MNI Atlas tools

rick reynolds September 12, 2008 04:21PM

Re: MNI Atlas tools

Anastasia Ford September 15, 2008 12:33PM

Re: MNI Atlas tools

Anastasia Ford September 15, 2008 01:19PM

Re: MNI Atlas tools

rick reynolds September 15, 2008 03:08PM

Re: MNI Atlas tools

Anastasia Ford September 16, 2008 12:40PM

Re: MNI Atlas tools

rick reynolds September 16, 2008 12:57PM

Re: MNI Atlas tools

Anastasia Ford September 18, 2008 12:11PM

Re: MNI Atlas tools

Kate Fissell October 30, 2008 02:25PM

Re: MNI Atlas tools

rick reynolds October 30, 2008 04:06PM

Re: MNI Atlas tools

Daniel Glen October 30, 2008 05:10PM

Re: MNI Atlas tools

Brent July 10, 2009 10:48AM

Re: MNI Atlas tools

Brent July 10, 2009 11:26AM

Re: MNI Atlas tools

Daniel Glen July 10, 2009 12:11PM

Re: MNI Atlas tools

Brent July 10, 2009 02:33PM