AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

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November 15, 2017 07:37PM
Hi Rick!

Really thanks for your reply!

For your first question, they aren't consecutive short events but single longer (6 s) events. That is to say, each event lasts for 6 seconds(e.g. first 6s showing a "L" on the screen is to ask subjects to do left hand task within the 6s, no matter how many tasks they can perform within the 6s and the same for right hand). And what do you mean by using longer response functions? Like TENT(b,c,n) to make parameter c as longer?

For using TENT(0,6,4), since each event lasts 6s, therefore I assume that the subjects can response within the 6s. If exceeding 6s, they may be asked to do other tasks. (The whole process is to ask subjects to do left or right hand task or keep rest within the 12min) So c is 6 and TR is 2, then n is 4.

And rest_time.1D, yes, just represents the time points that are not part of left_hand_time.1D and right_hand_time.1D. But if it is not be included, how can I use "gltsym" to do contrasts with the rest baseline ones? I've tried without rest_time.1D file and just find the results are not reasonable. I mean, when I chose Thr, like "lefthand#0_Tstat", on ANFI to see clustim results, all areas are included no matter small p values... Or did I use a wrong way to look at the results?

Looking forward to your reply. Thank you Rick

Best regards,
Tracy
Subject Author Posted

Fatal errors from 3dDeconvolve

TracyW November 10, 2017 06:21AM

Re: Fatal errors from 3dDeconvolve

TracyW November 13, 2017 07:44PM

Re: Fatal errors from 3dDeconvolve

rick reynolds November 15, 2017 09:44AM

Re: Fatal errors from 3dDeconvolve

TracyW November 15, 2017 07:37PM

Re: Fatal errors from 3dDeconvolve

rick reynolds November 17, 2017 08:35AM

Re: Fatal errors from 3dDeconvolve

TracyW November 18, 2017 01:14AM

Re: Fatal errors from 3dDeconvolve

rick reynolds November 20, 2017 09:23AM

Re: Fatal errors from 3dDeconvolve

TracyW November 20, 2017 10:28PM