Hi AFNI expert,
I have 1 anatomical image and 1 functional image that has been acquired with two different FOV orientations.
When I use different viewer (AFNI, MRIcron) the images superposed perfectly because (I don't know where but the orientation of the FOV is saved somewhere)
I have to do some manipulation on the images (obliquity, change the centre etc...) and this orientation is lost.
I am looking for the command that will send the orientation of the functional image into the anatomical space.
I thought that the command was:
3dresample -prefix func_resemple -master anat -input func
but apparently it doesn't match...
thank you for your help!!
Clément
