apqc_make_html.py

This program converts the contents of a QC directory that were created by apqc_make_tcsh.py into the APQC HTML doc, readable with any browser.

This program is usually run by afni_proc.py’s processing script, but users can run it as well, as needed, to regerate the APQC HTML.

++ written by PA Taylor (SSCC, NIMH, NIH, USA)

Running

To execute this program, run it like this, providing the name of the
directory created by apqc_make_tcsh.py:

   apqc_make_html.py -qc_dir QC_DIR

Options

-qc_dir QC_DIR  : (req) the name of the QC directory that was created by
                  apqc_make_tcsh.py (likely in the results directory from
                  running afni_proc.py)

-help           : display this (short) help

-hview          : display this (short) help in a GUI text window

Example

Note that in every example below, a user would probably have preceded
this command with 'apqc_make_tcsh.py ...'.


1) Consider final AP processing of a dataset with subject ID
   sub-000.  Then, the following could be run in the AP results
   directory (after afni_make_tcsh.py):

     apqc_make_html.py -qc_dir QC_sub-000