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uber_skel.py - sample uber processing program
(based on uber_align_test.py, version 0.2)
usage: uber_skel.py
---
This help describes only the command line options to this program, which
enables one to:
- initialize user variables (for GUI or command line)
- initialize control variables (for GUI or command line)
- pass PyQt4 options directly to the GUI
- run without the GUI
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Examples:
GUI examples:
uber_skel.py
uber_skel.py -qt_opts -style=motif
Informational examples:
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There are some programming comments available here:
uber_skel.py -help_howto_program
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uber_skel.py -help
uber_skel.py -help_gui
uber_skel.py -hist
uber_skel.py -show_valid_opts
uber_skel.py -ver
Non-GUI examples (all have -no_gui):
uber_skel.py -no_gui -print_script \
-uvar anat FT/FT_anat+orig \
-uvar epi FT/FT_epi_r1+orig
uber_skel.py -no_gui -save_script align.test \
-uvar anat FT/FT_anat+orig \
-uvar epi FT/FT_epi_r1+orig \
-uvar epi_base 2 \
-uvar epi_strip_meth 3dAutomask \
-uvar align_centers yes \
-uvar giant_move yes \
-uvar cost ls \
-uvar multi_list lpc lpc+ lpc+ZZ lpa
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- R Reynolds May, 2011
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