AFNI Message Board

Dear AFNI users-

We are very pleased to announce that the new AFNI Message Board framework is up! Please join us at:

https://discuss.afni.nimh.nih.gov

Existing user accounts have been migrated, so returning users can login by requesting a password reset. New users can create accounts, as well, through a standard account creation process. Please note that these setup emails might initially go to spam folders (esp. for NIH users!), so please check those locations in the beginning.

The current Message Board discussion threads have been migrated to the new framework. The current Message Board will remain visible, but read-only, for a little while.

Sincerely, AFNI HQ

History of AFNI updates  

Subject Author Posted

Using fieldmaps & gradients with Afni_proc.py

hannahw 07/11/2022 10:33AM

Group Level analysis with between subjects variable that varies within condition

MeganQ 06/22/2022 02:38PM

Re: Group Level analysis with between subjects variable that varies within condition

gang 06/23/2022 04:51PM

Re: Group Level analysis with between subjects variable that varies within condition

MeganQ 06/24/2022 08:39AM

Re: Group Level analysis with between subjects variable that varies within condition

gang 06/26/2022 08:43AM

Re: Group Level analysis with between subjects variable that varies within condition

MeganQ 06/27/2022 08:06AM

Re: Group Level analysis with between subjects variable that varies within condition

gang 06/28/2022 04:42PM

Re: Group Level analysis with between subjects variable that varies within condition

MeganQ 06/29/2022 08:30AM

Re: Group Level analysis with between subjects variable that varies within condition

MeganQ 07/11/2022 09:20AM

Re: Group Level analysis with between subjects variable that varies within condition

gang 07/11/2022 10:14AM

Re: Group Level analysis with between subjects variable that varies within condition

MeganQ 07/11/2022 10:23AM

Comparing conditions in AM on the group level - to demean or not?

MeganQ 07/11/2022 09:23AM

Re: Comparing conditions in AM on the group level - to demean or not?

gang 07/11/2022 10:18AM

Re: Comparing conditions in AM on the group level - to demean or not?

MeganQ 07/11/2022 10:23AM

**Error: Line too long for buffer of 5048576 chars.** (3dmaskdump)

Philipp 07/05/2022 06:32AM

Re: **Error: Line too long for buffer of 5048576 chars.** (3dmaskdump)

ptaylor 07/05/2022 01:20PM

Re: **Error: Line too long for buffer of 5048576 chars.** (3dmaskdump)

Philipp 07/06/2022 03:47AM

Re: **Error: Line too long for buffer of 5048576 chars.** (3dmaskdump)

rick reynolds 07/07/2022 12:07AM

Re: **Error: Line too long for buffer of 5048576 chars.** (3dmaskdump)

Philipp 07/07/2022 05:43AM

Number of bins in 3dLombScargle

Philipp 06/30/2022 02:31PM

Re: Number of bins in 3dLombScargle

ptaylor 07/05/2022 01:22PM

Re: Number of bins in 3dLombScargle

Philipp 07/06/2022 03:39AM

"No output dataset will be calculated" while running refacer

renyak 06/24/2022 03:37AM

Re: "No output dataset will be calculated" while running refacer

rick reynolds 06/24/2022 04:50PM

Re: "No output dataset will be calculated" while running refacer

renyak 06/27/2022 11:17AM

Re: "No output dataset will be calculated" while running refacer

rick reynolds 06/27/2022 12:21PM

Re: "No output dataset will be calculated" while running refacer

renyak 06/29/2022 06:57AM

Re: "No output dataset will be calculated" while running refacer

rick reynolds 06/29/2022 10:23AM

Re: "No output dataset will be calculated" while running refacer

ptaylor 06/29/2022 02:42PM

Re: "No output dataset will be calculated" while running refacer

renyak 07/01/2022 05:54AM

SIGSEV when trying to drive AFNI from command line

jbteves 06/29/2022 03:08PM

Re: SIGSEV when trying to drive AFNI from command line

ptaylor 06/29/2022 03:54PM

Re: SIGSEV when trying to drive AFNI from command line

ptaylor 06/29/2022 04:02PM

Re: SIGSEV when trying to drive AFNI from command line

jbteves 06/29/2022 04:16PM

Re: SIGSEV when trying to drive AFNI from command line

ptaylor 06/29/2022 04:53PM

Re: SIGSEV when trying to drive AFNI from command line

rick reynolds 06/29/2022 10:09PM

Re: SIGSEV when trying to drive AFNI from command line

jbteves 06/29/2022 10:32PM

Re: SIGSEV when trying to drive AFNI from command line

ptaylor 06/29/2022 10:42PM

Re: SIGSEV when trying to drive AFNI from command line

Daniel Glen 06/30/2022 04:50PM

Group level analysis with no contrasts

MeganQ 06/29/2022 09:28AM

Re: Group level analysis with no contrasts

gang 06/29/2022 01:12PM

Re: Group level analysis with no contrasts

MeganQ 06/30/2022 09:08AM

3dLSS and autoregressive modelling

angus paton 06/27/2022 10:57AM

Re: 3dLSS and autoregressive modelling

gang 06/28/2022 04:54PM

Transforming a mask to MNI

siamak 01/08/2009 01:25PM

Re: Transforming a mask to MNI

Daniel Glen 01/08/2009 03:45PM

Re: Transforming a mask to MNI

siamak 01/09/2009 01:17PM

Re: Transforming a mask to MNI

Daniel Glen 01/09/2009 02:50PM

Re: Transforming a mask to MNI - new issue

Jane McGrath 06/18/2011 01:46AM

Re: Transforming a mask to MNI - new issue

Daniel Glen 06/22/2011 12:08PM

Re: Transforming a mask to MNI - new issue

prerona 01/19/2018 05:19PM

Re: Transforming a mask to MNI - new issue

Daniel Glen 01/19/2018 06:59PM

Re: Transforming a mask to MNI - new issue

prerona 01/22/2018 10:29AM

Re: Transforming a mask to MNI - new issue

dante.picchioni 06/21/2022 03:19PM

Re: Transforming a mask to MNI - new issue

ptaylor 06/22/2022 12:36PM

Re: Transforming a mask to MNI - new issue Attachments

dante.picchioni 06/22/2022 05:16PM

Re: Transforming a mask to MNI - new issue

ptaylor 06/23/2022 10:11AM

Re: Transforming a mask to MNI - new issue

dante.picchioni 06/27/2022 01:46PM

Re: Transforming a mask to MNI - new issue

Daniel Glen 06/27/2022 05:33PM

Re: Transforming a mask to MNI - new issue

dante.picchioni 06/28/2022 01:17PM

AM script not producing AM output

MeganQ 06/28/2022 11:10AM

Re: AM script not producing AM output

rick reynolds 06/28/2022 11:59AM

Re: AM script not producing AM output

MeganQ 06/28/2022 12:30PM

Estimating Networks from ROIs Longitudinally

klei0742 06/20/2022 01:51PM

Re: Estimating Networks from ROIs Longitudinally

gang 06/25/2022 05:38AM

Question about 3dSkullStrip

Sue_TS 06/21/2022 04:42AM

Re: Question about 3dSkullStrip

rick reynolds 06/22/2022 02:09PM

Re: Question about 3dSkullStrip

Sue_TS 06/24/2022 05:02AM

Postdoc position

DeLab 06/23/2022 10:48PM

errts file with censored (scrubbed) volumes in functional connectivity

e0046902 06/21/2022 10:59PM

Re: errts file with censored (scrubbed) volumes in functional connectivity

rick reynolds 06/22/2022 02:04PM

Re: errts file with censored (scrubbed) volumes in functional connectivity

e0046902 06/22/2022 05:28PM

Re: errts file with censored (scrubbed) volumes in functional connectivity

rick reynolds 06/22/2022 08:29PM

Re: errts file with censored (scrubbed) volumes in functional connectivity

rick reynolds 06/22/2022 08:34PM

Re: errts file with censored (scrubbed) volumes in functional connectivity

e0046902 06/23/2022 07:31AM

Re: errts file with censored (scrubbed) volumes in functional connectivity

rick reynolds 06/23/2022 09:38AM

3dttest++ permute failure; use with 3dMEMA

d.r.alkire 06/14/2022 06:13PM

Re: 3dttest++ permute failure; use with 3dMEMA

rick reynolds 06/22/2022 04:48PM

Interpreting Covariate in 3dttest++

tamtam 06/18/2022 03:34PM

Re: Interpreting Covariate in 3dttest++

rick reynolds 06/21/2022 11:26AM

Re: Interpreting Covariate in 3dttest++

rick reynolds 06/22/2022 01:58PM

Calculating Outliers

Nikin Baidar 05/26/2022 09:51AM

Re: Calculating Outliers

rick reynolds 06/21/2022 10:10AM

test

tamtam 06/20/2022 06:14PM

Re: test

ptaylor 06/21/2022 09:55AM

Using Tedana via AFNI_proc.py

dhschultz 06/13/2022 12:12PM

Re: Using Tedana via AFNI_proc.py

jbteves 06/13/2022 02:13PM

Re: Using Tedana via AFNI_proc.py

rick reynolds 06/13/2022 02:21PM

Re: Using Tedana via AFNI_proc.py

dhschultz 06/14/2022 11:10AM

Re: Using Tedana via AFNI_proc.py

rick reynolds 06/14/2022 11:21AM

Re: Using Tedana via AFNI_proc.py

dhschultz 06/20/2022 05:46PM

Re: Using Tedana via AFNI_proc.py

rick reynolds 06/20/2022 10:32PM

Re: Using Tedana via AFNI_proc.py

dhschultz 06/14/2022 11:00AM