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AFNI, SUMA and FATCAT: v22.3.03
»
1.
Installation and Background
»
Unix Tutorial
Unix Tutorial
¶
Setup Pages
¶
1. What is … ? Unix, tcsh and AFNI
2. Opening a Terminal
3. Copy and Paste with Terminals
4. Installing AFNI (software)
5. Installing AFNI_data6 (sample class data)
Basic Unix Tutorial
¶
(prerequisite for AFNI classes)
1. Basic Unix : setup
2. Basic Unix : basic commands
3. Basic Unix :
bg
and
fg
processes
4. Basic Unix : light intro to shell scripts
5. Basic Unix : special characters
6. Basic Unix : shell variables
Unix commands
¶
1. Unix and shell commands
2. Error messages
Table of Contents
1. Installation and Background
1.1.
Install AFNI on Your Own Computer
1.2.
Install AFNI on Administered Systems
1.3.
Work with Docker/Containerized AFNI
1.4.
Download other/specific AFNI/SUMA software
Unix Tutorial
Setup Pages
1. What is … ? Unix, tcsh and AFNI
2. Opening a Terminal
3. Copy and Paste with Terminals
4. Installing AFNI (software)
5. Installing AFNI_data6 (sample class data)
Basic Unix Tutorial
1. Basic Unix : setup
2. Basic Unix : basic commands
3. Basic Unix :
bg
and
fg
processes
4. Basic Unix : light intro to shell scripts
5. Basic Unix : special characters
6. Basic Unix : shell variables
Unix commands
1. Unix and shell commands
2. Error messages
1.5.
Prep for Bootcamp
1.6.
Miniconda: Python(s) in a convenient setup
2. Starting with AFNI
3. Educational resources
4. All program helps
5. AFNI Codex: Code Examples from publications
6. SUMA
7. FATCAT
8. Statistics
9. Templates & Atlases
10. Non-human processing
11. Tutorials, Examples
12. Demo Material
13. Developer Documentation
14. References, papers and citations
15. Contributors
16. Glossary
17. Main AFNI pages
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