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  • 1. Installation and Background »

Unix Tutorial¶

Setup Pages¶

  • 1. What is … ? Unix, tcsh and AFNI
  • 2. Opening a Terminal
  • 3. Copy and Paste with Terminals
  • 4. Installing AFNI (software)
  • 5. Installing AFNI_data6 (sample class data)

Basic Unix Tutorial¶

(prerequisite for AFNI classes)

  • 1. Basic Unix : setup
  • 2. Basic Unix : basic commands
  • 3. Basic Unix : bg and fg processes
  • 4. Basic Unix : light intro to shell scripts
  • 5. Basic Unix : special characters
  • 6. Basic Unix : shell variables

Unix commands¶

  • 1. Unix and shell commands
  • 2. Error messages

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Table Of Contents

  • 1. Installation and Background
    • 1.1. Install AFNI on Your Own Computer
    • 1.2. Install AFNI on Administered Systems
    • 1.3. Work with Containerized AFNI
    • 1.4. Download other/specific AFNI/SUMA software
    • Unix Tutorial
      • Setup Pages
        • 1. What is … ? Unix, tcsh and AFNI
        • 2. Opening a Terminal
        • 3. Copy and Paste with Terminals
        • 4. Installing AFNI (software)
        • 5. Installing AFNI_data6 (sample class data)
      • Basic Unix Tutorial
        • 1. Basic Unix : setup
        • 2. Basic Unix : basic commands
        • 3. Basic Unix : bg and fg processes
        • 4. Basic Unix : light intro to shell scripts
        • 5. Basic Unix : special characters
        • 6. Basic Unix : shell variables
      • Unix commands
        • 1. Unix and shell commands
        • 2. Error messages
    • 1.5. Prep for Bootcamp
  • 2. Educational resources
  • 3. All program helps
  • 4. Publication-based code examples
  • 5. SUMA
  • 6. FATCAT
  • 7. Statistics
  • 8. Templates & Atlases
  • 9. Tutorials, Examples
  • 10. Demo Material
  • 11. Boring stuff
  • 12. Glossary
  • 13. References
  • 14. Main AFNI pages

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