1.2.1. Mac OS (admin’ed): the administrator part¶
Here we describe the administrator’s part of the AFNI installation and system setup for administered Mac OS versions 10.9+. Root privilege is required.
These are accompanied by instructions for regular users, which need to be performed after in order to complete the AFNI setup.
For OS X >= 10.11,
- Click on “Quick Download” DMG here and install:
For OS X 10.9 and 10.10:
xcode-select --install /Applications/Utilities/X11.app
- Click here to download a recent (but not the most recent) version of R:
Install specific R packages for AFNI (specified in the given script):
curl -LO https://afni.nimh.nih.gov/pub/dist/bin/macos_10.12_local/@afni_R_package_install tcsh @afni_R_package_install -afni
bash shell syntax:
ruby -e "$(curl -fsSL https://raw.githubusercontent.com/Homebrew/install/master/install)" < /dev/null 2> /dev/null brew install netpbm
Most AFNI scripts are written in
tcsh, and most command line
examples presented also use
tcsh syntax. While not necessary, it
might make sense to have this the be the default shell for a user. If
you would like to do so, this can be done by clicking through the
following: “System Preferences” -> “Users & Groups” -> click on lock
and enter password -> right click on the username and go to “Advanced
options” -> go down to where shell is and enter desired one.