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  • 11. Tutorials, Examples »
  • 11.4. APQC: afni_proc.py quality control

11.4. APQC: afni_proc.py quality control¶

  • 11.4.1. Overview for APQC
    • Description
    • Background: what afni_proc.py does
    • Portability: how to share the APQC
    • Saving ratings and comments
  • 11.4.2. APQC-HTML navigation: example
    • Description: the afni_proc.py command
    • The APQC HTML document
  • 11.4.3. Browsing APQC outputs
    • Overview
    • IDs in the HTML page
    • Command line examples to view HTML output
    • Using a script to load many APQC-HTML files
    • Closing browser tabs
    • Some comments on browsing
    • Opening images in a new tab

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Table of Contents

  • 1. Installation and Background
  • 2. Starting with AFNI
  • 3. Educational resources
  • 4. All program helps
  • 5. AFNI (and afni)
  • 6. SUMA
  • 7. FATCAT
  • 8. Statistics
  • 9. Templates & Atlases
  • 10. Non-human processing
  • 11. Tutorials, Examples
    • 11.1. Self Guided Demo Scripts
    • 11.2. AFNI GUI features
    • 11.3. AFNI general behavior
    • 11.4. APQC: afni_proc.py quality control
      • 11.4.1. Overview for APQC
      • 11.4.2. APQC-HTML navigation: example
      • 11.4.3. Browsing APQC outputs
    • 11.5. FATCAT: DWI {Pre-pre-, Pre-, Post-pre}processing
    • 11.6. FATCAT Visualization
    • 11.7. Walnut Brain
    • 11.8. Drawing ROIs
    • 11.9. Cluster Explorer
    • 11.10. FATCAT Matrix Plot
    • 11.11. 3dMVM Validator
    • 11.12. Automatic Images
    • 11.13. Sound features in AFNI
    • 11.14. Working with ROIs
    • 11.15. Using FreeSurfer
    • 11.16. Reface and Deface datasets
    • 11.17. SurfLayers Demo
    • 11.18. Meta analysis examples
  • 12. Demo Material
  • 13. AFNI Codex: Code Examples from publications
  • 14. Citing
  • 15. Developer Documentation
  • 16. Contributors
  • 17. Glossary
  • 18. Main AFNI pages

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